Prepare for CRAN v0.1.11 release

* Updated maintainer contact information

DESCRIPTION

@@ -1,13 +1,13 @@
 Package: gateR
 Type: Package
 Title: Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
-Version: 0.1.11
-Date: 2022-08-25
+Version: 0.1.12
+Date: 2022-12-01
 Authors@R: 
     c(person(given = "Ian D.",
              family = "Buller",
              role = c("aut", "cre", "cph"),
-             email = "ian.buller@nih.gov",
+             email = "ian.buller@alumni.emory.edu",
              comment = c(ORCID = "0000-0001-9477-8582")),
       person(given = "Elena",
              family = "Hsieh",
@@ -26,7 +26,7 @@ Authors@R:
              comment = c(ORCID = "0000-0001-5002-8886")),
       person(given = "NCI",
              role = "cph"))
-Maintainer: Ian D. Buller <ian.buller@nih.gov>
+Maintainer: Ian D. Buller <ian.buller@alumni.emory.edu>
 Description: Estimates statistically significant marker combination values within
         which one immunologically distinctive group (i.e., disease case) is more associated than
         another group (i.e., healthy control), successively, using various combinations (i.e.,

NEWS.md

@@ -1,5 +1,8 @@
 # gateR (development version)
 
+# gateR v0.1.12
+  * Updated maintainer contact information
+
 # gateR v0.1.11
   * Updated package URL and BugReports to renamed GitHub account "lance-waller-lab" (previously "Waller-SUSAN")
   * Replaced `if()` conditions comparing `class()` to string with `inherits()` in functions

R/package.R

@@ -28,7 +28,7 @@
 #' 
 #' @author Ian D. Buller\cr \emph{Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, National Institutes of Health, Rockville, Maryland, USA.}
 #' 
-#' Maintainer: I.D.B. \email{ian.buller@@nih.gov}
+#' Maintainer: I.D.B. \email{ian.buller@@alumni.emory.edu}
 #'
 #' @keywords package
 NULL

README.md

@@ -10,7 +10,7 @@ gateR: Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation <img src
 [![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.5347892.svg)](https://doi.org/10.5281/zenodo.5347892)
 <!-- badges: end -->
 
-**Date repository last updated**: August 25, 2022
+**Date repository last updated**: December 01, 2022
 
 <h2 id="overview">
 
@@ -89,6 +89,8 @@ Available functions
 </tbody>
 <table>
 
+The repository also includes the code and resources to create the project hexagon sticker.
+
 <h2 id="available-data">
 
 Available sample data sets
@@ -102,7 +104,7 @@ Available sample data sets
 </colgroup>
 <thead>
 <tr class="header">
-<th>Function</th>
+<th>Data</th>
 <th>Description</th>
 </tr>
 </thead>
@@ -260,4 +262,4 @@ When citing this package for publication, please follow:
 
 ### Questions? Feedback?
 
-For questions about the package, please contact the maintainer [Dr. Ian D. Buller](mailto:ian.buller@nih.gov) or [submit a new issue](https://github.com/lance-waller-lab/gateR/issues).
+For questions about the package, please contact the maintainer [Dr. Ian D. Buller](mailto:ian.buller@alumni.emory.edu) or [submit a new issue](https://github.com/lance-waller-lab/gateR/issues).

cran-comments.md

@@ -1,23 +1,7 @@
-## This is the eleventh resubmission
-
-* First resubmission after CRAN archived `gateR` on 2022-08-08 because a dependency `SpatialPack` and its dependency `fastmatrix` were archived. Since the warning from CRAN 2022-07-20, the `gateR` maintainer worked with the maintainer of both packages. The dependencies have returned to CRAN and this maintainer is now resubmitting `gateR`.
-
-* Actions taken regarding feedback from CRAN teams' auto-check service:
-  * Replaced `if()` conditions comparing `class()` to string with `inherits()`
+## This is the twelth resubmission
 
 * Updates since previous submission:
-  * Updated package URL and BugReports to renamed GitHub account "lance-waller-lab" (previously "Waller-SUSAN")
-  * `tools` is no longer Imports
-  * `utils` is now Suggests because "zzz.R" calls the `packageDescription()` function
-  * `ncdfFlow`, `flowWorkspaceData` are no longer Suggests because "Package suggested but not available for checking" in the following CRAN environments:
-    * r-devel-linux-x86_64-fedora-clang
-    * r-devel-linux-x86_64-fedora-gcc
-    * r-devel-windows-x86_64-new-TK
-    * r-release-linux-x86_64
-    * r-release-macos-x86_64
-    * r-oldrel-macos-x86_64
-  * Added CITATION file
-  * Fixed typos in documentation throughout
+  * Updated maintainer contact information
 
 * Documentation for DESCRIPTION references the following DOIs that throw a NOTE in win-builder, Fedora Linux, and Ubuntu Linux but are valid URLs:
   * <https://doi.org/10.1002/sim.4780090616>

inst/CITATION

@@ -5,15 +5,15 @@ citEntry(entry = "manual",
   author        = personList(as.person("Ian D. Buller")),
   publisher     = "The Comprehensive R Archive Network",
   year          = "2022",
-  number        = "0.1.11",
+  number        = "0.1.12",
   doi           = "10.5281/zenodo.5347892",
   url           = "https://cran.r-project.org/package=gateR",
 
   textVersion = 
   paste("Ian D. Buller (2022).",
         "gateR: Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation.",
         "The Comprehensive R Archive Network.",
-        "v0.1.11.",
+        "v0.1.12.",
         "DOI:10.5281/zenodo.5347892",
         "Accessed by: https://cran.r-project.org/package=gateR")
 )