1.3.6

What's Changed

• PTV-1866: Deal with NaN and Inf values correctly and consistently by @MrCreosote in #183
• PTV-1866: Update GHA to latest KBase versions by @MrCreosote in #187

Full Changelog: 1.3.5...1.3.6

1.3.5

What's Changed

• PTV-1767: Fix file metadata incomplete return bug by @MrCreosote in #176

Full Changelog: 1.3.4...1.3.5

1.3.4

What's Changed

• DATAUP-727: Fix an import spec parse bug re trailing separators by @MrCreosote in #168
• DATAUP-746: empty types dictionary throws an error by @ialarmedalien in #171

New Contributors

• @ialarmedalien made their first contribution in #171

Full Changelog: 1.3.3...1.3.4

1.3.2

Version 1.3.2

Add write_bulk_specification endpoint for writing bulk specifications
Add import_filetypes endpoint for getting datatype -> filetype -> extension mappings
Fixed a bug in the csv/tsv bulk specification parser that would throw an error on any empty lines in the file, even at the end. The parser now ignores empty lines the same way the Excel parser does.
Fixed a bug in the bulk_specification endpoint where a missing header item in a *.?sv file would cause it to be replaced with a strange name.
Fixed a bug in the bulk_specification endpoint where a missing header item in an Excel file would cause a duplicate header error rather than a missing header error.
As part of the two fixes above, some error message text has changed due to the rewrite of the parsers.

Version 1.3.1

added the files key to the returned data from the bulk_specification endpoint.

Version 1.3.0

Update to Python 3.9
Add bulk_specification endpoint for parsing import specifications

Version 1.2.0

BACKWARDS INCOMPATIBILITY: remove the unused apps key from the importer mappings endpoint.
added a fileinfo field to the return of the importer mappings endpoint that includes the file prefix, suffix, and file type(s), if any.
reverted change to expose dotfiles in the api by default
attempting to upload a dotfile will now cause an error

Version 1.1.9

Added support for Genbank *.gb and *.gbff extensions
Added support for gzipped Reads, Assemblies, Genbank Files, and GFF files.

Version 1.1.8

Added new endpoint importer-mappings/ for getting a mapping of importers for file names
Updated endpoint to use GET and query_string
Ran black
BUGFIX: Change head/tail functionality to return 1024 chars to avoid bad cases with really large one line files
Update FASTQ/SRA to use their own APP Uis

1.1.8

Version 1.1.8

• Added new endpoint importer-mappings/ for getting a mapping of importers for file names
• Ran black

Version 1.1.7

• Add a file name check to void user uploading files with name starting with space
• Update list endpoint so that it only hide .globus_id file by default

Version 1.1.3

• Add a add-acl-concierge endpoint
• Added configs for that endpoint
• Added options to dockerfile/docker-compose

Version 1.1.2

• Added capability to check 'kbase_session_backup' cookie
• Added a add-acl and remove-acl endpoint for globus endpoint access
• Change logging to STDOUT

Version 1.1.0

• Added a download endpoint for files

Add-acl-concierge

Add-acl-concierge