Test loading of the main experiment name. #13
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| on: | |
| push: | |
| branches: | |
| - master | |
| pull_request: | |
| name: Run tests | |
| jobs: | |
| setup-r: | |
| runs-on: ubuntu-latest | |
| container: bioconductor/bioconductor_docker:devel | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Set directories | |
| run: | | |
| echo "R_PKG_DIR=${R_HOME}/site-library" >> $GITHUB_ENV | |
| - name: Restore the package directory | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_PKG_DIR }} | |
| key: check-packages | |
| - name: Install dependencies | |
| shell: Rscript {0} | |
| run: | | |
| BiocManager::install("alabaster.sce") | |
| - name: Build test objects | |
| run: | | |
| find tests -name "*.R" -exec R -f {} \; | |
| - name: Upload test files | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: test-files | |
| path: objects | |
| test-js: | |
| runs-on: ubuntu-latest | |
| needs: setup-r | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Node | |
| uses: actions/setup-node@v3 | |
| with: | |
| node-version: 20 | |
| - name: Restore the node modules | |
| uses: actions/cache@v3 | |
| with: | |
| path: '**/node_modules' | |
| key: modules-${{ hashFiles('**/package.json') }} | |
| - name: Download test files | |
| uses: actions/download-artifact@v3 | |
| with: | |
| name: test-files | |
| path: objects | |
| - name: Install packages | |
| run: npm i --include-dev | |
| - name: Run tests | |
| run: npm run test |