Trialization

[CBroz1]

Depends on:

• interface PR
• element-miniscope PR suggestion

Added

• Trial data files
• ingestion functions first pass - needs testing bc element-interface version did not include allow_direct_insert arg
• analysis.py script for downstream analysis - adjusted for attribute differences
• fully functional notebooks except 04

Needs

• integration tests - Nice to have
• adjustment of scan time in analysis.py
• verification of fake equipment data in notebooks/03

Note: I have the following in my .bash_profile to expedite jupytext process, which motivated the scripts/ -> py_scripts/ rename. We could adopt another convention.

alias jupysync='jupytext --sync notebooks/0*ipynb; mv notebooks/*py notebooks/py_scripts'

[kabilar]

Hi @CBroz1, just a heads up, I made the mistake of directly committing Thinh's suggestions to your fork/branch.

[kabilar]

Thank you for these updates, @CBroz1!

[kabilar]

I removed trial 50 since the start time occurred before trials 47-49.