Uses Jupyter notebook. Single Run describes the functions in detail while Batch Run simply runs multiple files into multiple output files. Each input file produces its own output file.
Main features are as follows:
Filter data
- peakutil baseline (baseline correction)
- SG Filter (https://en.wikipedia.org/wiki/Savitzky–Golay_filter)
- Peak Detection
- Burst Detection
Output
- Breaths
- Recording Length (s)
- Mean Breath Rate
- Minute Ventilation
- AUC
- AUC STD
- Insp Time mean
- Insp Time std
- Exp Time mean
- Exp Time std
- TTotal Time mean
- TTotal Time std
- Apnea Count
- TI Sample Entropy
- TE Sample Entropy
- TTot Sample Entropy
- TI Shannon Entropy
- TE Shannon Entropy
- TTot interburst intervalShannon Entropy
- Poincare SD 1 Total Cycle time
- Poincare SD 2 Total Cycle time
- Poincare SD1/SD2 Ratio Total Cycle Time
- Poincare SD 1 Burst Duration
- Poincare SD 2 Burst Duration
- Poincare SD1/SD2 Ratio Total Cycle Time
- Poincare SD 1 Interburst Interval
- Poincare SD 2 Interburst Interval
- Poincare SD1/SD2 Ratio Interburst Interval
- Poincare Plots (y = SD1, x = SD2) with ellipses