Code

Simplify Imputor API#69

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rofinn merged 19 commits intomasterinvenia/Impute.jl:masterfrom rf/simplifyinvenia/Impute.jl:rf/simplifyCopy head branch name to clipboardOct 14, 2020

+4,328-1,872

Commits

Commits on Sep 29, 2020

• Remove context to simplify imputation code.

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• Replace context limits with a threshold assertion type.

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• Introduce function interface for threshold.

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Commits on Sep 30, 2020

• Initial work on improving support for dims and other cleanup.

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Commits on Oct 1, 2020

• Finished reworking dims changes.

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• Simplify dims code a bit more by explicitly using NamedDims.jl

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• Chain is no longer an imputor.

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Commits on Oct 2, 2020

• Added a Standardize imputor which handles replace user defined 'missing' values with actual missings.

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Commits on Oct 3, 2020

• Replaced Impute.Fill with Impute.Replace for constants and Impute.Substitute for substituting summary statistics.

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Commits on Oct 6, 2020

• Update doctests and run documenter doctests in runtests.jl.

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• Finish moving various imputor testsets into independent files.

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• Added more NamedDims and AxisKeys tests.

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Commits on Oct 8, 2020

• Lots of documentation updates and minor bug fixes/improvements.

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• Run CI on julia 1.5 and move deprecated matrix block into jobs so documentation builds again.

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Commits on Oct 9, 2020

• Removed redundant/unreachable code and added more tests.

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Commits on Oct 11, 2020

• Minor changes from review comments.

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• Use a ThresholdError for clearer error messages.

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• Fix outdated imputor docstring.

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Commits on Oct 14, 2020

• Test Threshold showerror method.

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