Unify picks feature branch: default parameters#1533

Merged

osenan merged 45 commits into

default_values2@279-interactive_variables@main

May 18, 2026

GitHub Actions / Unit Tests Summary failed May 18, 2026 in 0s

1 errors, 8 fail, 778 pass in 2h 0m 7s

1 files ±0 73 suites ±0 2h 0m 7s ⏱️ - 1m 44s
787 tests ±0 778 ✅ ±0 0 💤 ±0 8 ❌ ±0 1 🔥 ±0
2 588 runs ±0 2 579 ✅ ±0 0 💤 ±0 8 ❌ ±0 1 🔥 ±0

Results for commit 96aeaa5. ± Comparison against earlier commit 3e3863c.

Annotations

Check warning on line 0 in shinytest2_tm_g_km

github-actions / Unit Tests Summary

1 out of 2 runs failed: e2e_tm_g_km_Deselecting_arm_var_throws_validation_error. (shinytest2_tm_g_km)

teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 0s]

Raw output


            Expected `app_driver$get_text(app_driver$namespaces(TRUE)$module("myplot-plot_out_main"))` to match string "Treatment variable must be selected.". ('test-shinytest2-tm_g_km.R:207:3')
Expected `app_driver$get_text(app_driver$namespaces(TRUE)$module("myplot-plot_out_main"))` to match string "Treatment variable must be selected.".
Actual text:
x | A treatment variable must be selected.

Check failure on line 0 in shinytest2_tm_t_events_patyear

github-actions / Unit Tests Summary

e2e_tm_t_events_patyear_Starts_with_specified_label_arm_var_paramcd_conf_level_conf_method_num_pt_year_input_time_unit_add_total_drop_arm_levels. (shinytest2_tm_t_events_patyear) with error

teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 43s]

Raw output


            Error in `chromote_wait_for_condition(self$get_chromote_session(), script, timeout = timeout, interval = interval)`: Timed out waiting for JavaScript script to return `true` ('test-shinytest2-tm_t_events_patyear.R:58:5')
Error in `chromote_wait_for_condition(self$get_chromote_session(), script, timeout = timeout, interval = interval)`: Timed out waiting for JavaScript script to return `true`
i `timeout`: 30000
i `script`:
(() => {
  const el = document.getElementById("#teal-teal_modules-nav-ae_rate_adjusted_for_patient_years_at_risk_table-module-input_time_unit");
  return el !== null && typeof el.value === "string" && el.value.length > 0;
})()
Backtrace:
    x
 1. \-teal.modules.clinical:::wait_until_nonempty_active_module_input(...) at test-shinytest2-tm_t_events_patyear.R:58:5
 2.   \-app_driver$wait_for_js(...) at ./helper-TealAppDriver.R:177:3
 3.     \-shinytest2:::app_wait_for_js(...)
 4.       \-shinytest2:::chromote_wait_for_condition(self$get_chromote_session(), script, timeout = timeout, interval = interval)
 5.         \-rlang::abort(...)

Check warning on line 0 in shinytest2_tm_t_pp_laboratory

github-actions / Unit Tests Summary

1 out of 2 runs failed: e2e_tm_t_pp_laboratory_Selecting_patient_id_changes_the_table_and_does_not_throw_validation_errors. (shinytest2_tm_t_pp_laboratory)

teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 12s]

Raw output


            Expected `identical(...)` to be FALSE. ('test-shinytest2-tm_t_pp_laboratory.R:123:5')
Expected `identical(...)` to be FALSE.
Differences:
`actual`:   TRUE 
`expected`: FALSE

Check warning on line 0 in shinytest2_tm_t_pp_laboratory

github-actions / Unit Tests Summary

1 out of 2 runs failed: e2e_tm_t_pp_laboratory_Selecting_paramcd_changes_the_table_and_does_not_throw_validation_errors. (shinytest2_tm_t_pp_laboratory)

teal.modules.clinical.Rcheck/tests/testthat/junit-result.xml [took 13s]

Raw output


            Expected `identical(...)` to be FALSE. ('test-shinytest2-tm_t_pp_laboratory.R:160:5')
Expected `identical(...)` to be FALSE.
Differences:
`actual`:   TRUE 
`expected`: FALSE

Check warning on line 0 in shinytest2_tm_t_pp_laboratory

github-actions / Unit Tests Summary

1 out of 2 runs failed: e2e_tm_t_pp_laboratory_Selecting_param_changes_the_table_and_does_not_throw_validation_errors. (shinytest2_tm_t_pp_laboratory)