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Update deprecated parameters
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igordot committed Oct 16, 2024
1 parent bb71acc commit b47eaa4
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions app.R
Original file line number Diff line number Diff line change
Expand Up @@ -195,7 +195,8 @@ server <- function(input, output) {
avg_exp_norm = mean(exp_norm),
avg_exp_log = mean(exp_log),
std_dev_norm = sd(exp_norm),
std_dev_log = sd(exp_log)
std_dev_log = sd(exp_log),
.groups = "keep"
) %>%
mutate(
std_err_norm = std_dev_norm / sqrt(num_cells),
Expand All @@ -212,7 +213,7 @@ server <- function(input, output) {
geom_col(aes(fill = cluster), color = "black", size = 1) +
geom_errorbar(
aes(ymin = avg_exp_norm - std_err_norm, ymax = avg_exp_norm + std_err_norm),
width = 0.3, size = 1
width = 0.3, linewidth = 1
) +
labs(title = input$in_gene, x = "Cluster", y = "Norm. Expr. Level") +
scale_y_continuous(limits = c(0, y_limit), expand = c(0, 0)) +
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