PR for updated halophot#17
Open
JonatanRudrasingam wants to merge 18 commits into
Open
Conversation
k2sc is outdated, so the function test_k2sc was comment out
Collaborator
|
@copilot fix the dependencies issues - it is currently failing with from statsmodels.nonparametric.bandwidths import select_bandwidth
E ModuleNotFoundError: No module named 'statsmodels'Search for any other dependency issues and edit this PR to fix them. |
… step Agent-Logs-Url: https://github.com/hvidy/halophot/sessions/63ced909-ab7e-425b-8ea0-0a2051f9ee48 Co-authored-by: benjaminpope <6024213+benjaminpope@users.noreply.github.com>
... Fixed in commit fa6ea0b. The root cause was that Changes made:
|
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
python setup.py installdoesn't installinstall_requiresdepstqdmto requirements.txt (it's imported in halo_tools.py but was missing)k2scfrom requirements.txt (installed separately from GitHub in CI; avoids PyPI lookup failures)pybind11from requirements.txt (build tool, not a runtime dependency)pip install -r requirements.txtstep and replacepython setup.py installwithpip install --no-deps .✨ Let Copilot coding agent set things up for you — coding agent works faster and does higher quality work when set up for your repo.