update dependency

.github/workflows/explorer-python-3.10-darshan-3.4.0.yml → .github/workflows/darshan-3.4.2.yml

@@ -1,145 +1,140 @@
-name: DXT Explorer (Python 3.10)
+name: DXT Explorer (Darshan 3.4.2)
 
 on:
   pull_request:
-  push:
   workflow_dispatch:
 
+concurrency:
+  group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
+  cancel-in-progress: true
+
 jobs:
   explorer:
-    runs-on: ubuntu-latest
-    container: python:3.10
-    timeout-minutes: 60
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: ["ubuntu-latest", "macos-latest"]
+        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
+
+    timeout-minutes: 20
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           submodules: true
 
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
       - name: Dependencies
         run: |
           git clone https://github.com/darshan-hpc/darshan.git
 
-      - name: Build Darshan
+      - name: Install macOS Dependencies
+        if: runner.os == 'macOS'
         run: |
-          export DARSHAN_DIR=/opt/darshan
+          brew install libtool autoconf automake
 
-          mkdir $DARSHAN_DIR
+      - name: Build Darshan
+        run: |
           cd darshan
           git checkout darshan-3.4.0
           bash prepare.sh
           cd darshan-util
-          ./configure --prefix=$DARSHAN_DIR
+          ./configure
           make
-          make install
+          sudo make install
+
+      - name: Configure Linux
+        if: runner.os == 'Linux'
+        run: |
+          sudo ldconfig
 
       - name: Install DXT Explorer
         run: |
-          pip install --upgrade pip
+          python -m ensurepip --upgrade
+          pip install --upgrade setuptools
           pip install darshan==3.4.0.1
           pip install -r requirements.txt
           pip install .
 
       - name: Run DXT Explorer (help)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer -h
 
       - name: Run DXT Explorer (list)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --list sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (operation)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (transfer)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --transfer sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan 
 
       - name: Run DXT Explorer (spatiality)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --spatiality sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (io phase)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --io_phase sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (ost usage operation)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --ost_usage_operation sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (ost usage transfer)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --ost_usage_transfer sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (rank zero workload)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --rank_zero_workload sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (unbalanced workload)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --unbalanced_workload sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (stragglers)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --stragglers sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate runtime)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --start 3.7 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate runtime)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --end 3.9 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate rank)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --from 1 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate rank)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --to 100 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate both)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --start 3.7 --end 3.9 --from 1 --to 100 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
+      - name: Setup upterm session
+        if: ${{ failure() }}
+        uses: owenthereal/action-upterm@v1
+
       - name: Upload Artifact
         if: always()
         uses: actions/upload-artifact@v4
         with:
-          name: tests
+          name: tests-${{ matrix.os }}-${{ matrix.python-version }}
           path: sample/**
           retention-days: 1
+
+

.github/workflows/explorer-python-3.10-darshan-3.4.1.yml → .github/workflows/darshan-3.4.4.yml

@@ -1,145 +1,140 @@
-name: DXT Explorer (Python 3.10)
+name: DXT Explorer (Darshan 3.4.4)
 
 on:
   pull_request:
-  push:
   workflow_dispatch:
 
+concurrency:
+  group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
+  cancel-in-progress: true
+
 jobs:
   explorer:
-    runs-on: ubuntu-latest
-    container: python:3.10
-    timeout-minutes: 60
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: ["ubuntu-latest", "macos-latest"]
+        python-version: ["3.8", "3.9", "3.10", "3.11"]
+
+    timeout-minutes: 20
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
         with:
           submodules: true
 
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.python-version }}
+
       - name: Dependencies
         run: |
           git clone https://github.com/darshan-hpc/darshan.git
 
-      - name: Build Darshan
+      - name: Install macOS Dependencies
+        if: runner.os == 'macOS'
         run: |
-          export DARSHAN_DIR=/opt/darshan
+          brew install libtool autoconf automake
 
-          mkdir $DARSHAN_DIR
+      - name: Build Darshan
+        run: |
           cd darshan
-          git checkout darshan-3.4.1
+          git checkout darshan-3.4.4
           bash prepare.sh
           cd darshan-util
-          ./configure --prefix=$DARSHAN_DIR
+          ./configure
           make
-          make install
+          sudo make install
+
+      - name: Configure Linux
+        if: runner.os == 'Linux'
+        run: |
+          sudo ldconfig
 
       - name: Install DXT Explorer
         run: |
-          pip install --upgrade pip
-          pip install darshan==3.4.1
+          python -m ensurepip --upgrade
+          pip install --upgrade setuptools
+          pip install darshan==3.4.4
           pip install -r requirements.txt
           pip install .
 
       - name: Run DXT Explorer (help)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer -h
 
       - name: Run DXT Explorer (list)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --list sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (operation)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (transfer)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --transfer sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan 
 
       - name: Run DXT Explorer (spatiality)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --spatiality sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (io phase)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --io_phase sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (ost usage operation)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --ost_usage_operation sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (ost usage transfer)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --ost_usage_transfer sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (rank zero workload)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --rank_zero_workload sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (unbalanced workload)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --unbalanced_workload sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (stragglers)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --stragglers sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate runtime)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --start 3.7 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate runtime)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --end 3.9 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate rank)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --from 1 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate rank)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --to 100 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
       - name: Run DXT Explorer (truncate both)
         run: |
-          export PATH=/opt/darshan/bin:$PATH
-
           dxt-explorer --debug --start 3.7 --end 3.9 --from 1 --to 100 sample/jeanbez_8_benchmark_parallel_id45195555_8-6-50011-11681279140261054765_1628283217.darshan
 
+      - name: Setup upterm session
+        if: ${{ failure() }}
+        uses: owenthereal/action-upterm@v1
+
       - name: Upload Artifact
         if: always()
         uses: actions/upload-artifact@v4
         with:
-          name: tests
+          name: tests-${{ matrix.os }}-${{ matrix.python-version }}
           path: sample/**
           retention-days: 1
+
+