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edit minima template to have periodic table
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| _site | ||
| .sass-cache | ||
| .jekyll-metadata | ||
| __pycache__ | ||
| .DS_Store |
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| --- | ||
| layout: default | ||
| --- | ||
|
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| <style type="text/css" media="screen"> | ||
| .container { | ||
| margin: 10px auto; | ||
| max-width: 600px; | ||
| text-align: center; | ||
| } | ||
| h1 { | ||
| margin: 30px 0; | ||
| font-size: 4em; | ||
| line-height: 1; | ||
| letter-spacing: -1px; | ||
| } | ||
| </style> | ||
|
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| <div class="container"> | ||
| <h1>404</h1> | ||
|
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| <p><strong>Element not found :(</strong></p> | ||
| <p>The requested element could not be found. | ||
|
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| Create a page for this element in the elements directory! | ||
| </p> | ||
| </div> |
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| source "https://rubygems.org" | ||
|
|
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| # Hello! This is where you manage which Jekyll version is used to run. | ||
| # When you want to use a different version, change it below, save the | ||
| # file and run `bundle install`. Run Jekyll with `bundle exec`, like so: | ||
| # | ||
| # bundle exec jekyll serve | ||
| # | ||
| # This will help ensure the proper Jekyll version is running. | ||
| # Happy Jekylling! | ||
| # gem "jekyll", "~> 3.8.5" | ||
|
|
||
| # This is the default theme for new Jekyll sites. You may change this to anything you like. | ||
| gem "minima", "~> 2.5" | ||
|
|
||
| # If you want to use GitHub Pages, remove the "gem "jekyll"" above and | ||
| # uncomment the line below. To upgrade, run `bundle update github-pages`. | ||
| gem "github-pages", group: :jekyll_plugins | ||
|
|
||
| # If you have any plugins, put them here! | ||
| group :jekyll_plugins do | ||
| gem "jekyll-feed", "~> 0.6" | ||
| end | ||
|
|
||
| # Windows does not include zoneinfo files, so bundle the tzinfo-data gem | ||
| gem "tzinfo-data", platforms: [:mingw, :mswin, :x64_mingw, :jruby] | ||
|
|
||
| # Performance-booster for watching directories on Windows | ||
| gem "wdm", "~> 0.1.0" if Gem.win_platform? |
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| GEM | ||
| remote: https://rubygems.org/ | ||
| specs: | ||
| activesupport (4.2.11.1) | ||
| i18n (~> 0.7) | ||
| minitest (~> 5.1) | ||
| thread_safe (~> 0.3, >= 0.3.4) | ||
| tzinfo (~> 1.1) | ||
| addressable (2.6.0) | ||
| public_suffix (>= 2.0.2, < 4.0) | ||
| coffee-script (2.4.1) | ||
| coffee-script-source | ||
| execjs | ||
| coffee-script-source (1.11.1) | ||
| colorator (1.1.0) | ||
| commonmarker (0.17.13) | ||
| ruby-enum (~> 0.5) | ||
| concurrent-ruby (1.1.5) | ||
| dnsruby (1.61.2) | ||
| addressable (~> 2.5) | ||
| em-websocket (0.5.1) | ||
| eventmachine (>= 0.12.9) | ||
| http_parser.rb (~> 0.6.0) | ||
| ethon (0.12.0) | ||
| ffi (>= 1.3.0) | ||
| eventmachine (1.2.7) | ||
| execjs (2.7.0) | ||
| faraday (0.15.4) | ||
| multipart-post (>= 1.2, < 3) | ||
| ffi (1.11.0) | ||
| forwardable-extended (2.6.0) | ||
| gemoji (3.0.1) | ||
| github-pages (198) | ||
| activesupport (= 4.2.11.1) | ||
| github-pages-health-check (= 1.16.1) | ||
| jekyll (= 3.8.5) | ||
| jekyll-avatar (= 0.6.0) | ||
| jekyll-coffeescript (= 1.1.1) | ||
| jekyll-commonmark-ghpages (= 0.1.5) | ||
| jekyll-default-layout (= 0.1.4) | ||
| jekyll-feed (= 0.11.0) | ||
| jekyll-gist (= 1.5.0) | ||
| jekyll-github-metadata (= 2.12.1) | ||
| jekyll-mentions (= 1.4.1) | ||
| jekyll-optional-front-matter (= 0.3.0) | ||
| jekyll-paginate (= 1.1.0) | ||
| jekyll-readme-index (= 0.2.0) | ||
| jekyll-redirect-from (= 0.14.0) | ||
| jekyll-relative-links (= 0.6.0) | ||
| jekyll-remote-theme (= 0.3.1) | ||
| jekyll-sass-converter (= 1.5.2) | ||
| jekyll-seo-tag (= 2.5.0) | ||
| jekyll-sitemap (= 1.2.0) | ||
| jekyll-swiss (= 0.4.0) | ||
| jekyll-theme-architect (= 0.1.1) | ||
| jekyll-theme-cayman (= 0.1.1) | ||
| jekyll-theme-dinky (= 0.1.1) | ||
| jekyll-theme-hacker (= 0.1.1) | ||
| jekyll-theme-leap-day (= 0.1.1) | ||
| jekyll-theme-merlot (= 0.1.1) | ||
| jekyll-theme-midnight (= 0.1.1) | ||
| jekyll-theme-minimal (= 0.1.1) | ||
| jekyll-theme-modernist (= 0.1.1) | ||
| jekyll-theme-primer (= 0.5.3) | ||
| jekyll-theme-slate (= 0.1.1) | ||
| jekyll-theme-tactile (= 0.1.1) | ||
| jekyll-theme-time-machine (= 0.1.1) | ||
| jekyll-titles-from-headings (= 0.5.1) | ||
| jemoji (= 0.10.2) | ||
| kramdown (= 1.17.0) | ||
| liquid (= 4.0.0) | ||
| listen (= 3.1.5) | ||
| mercenary (~> 0.3) | ||
| minima (= 2.5.0) | ||
| nokogiri (>= 1.8.5, < 2.0) | ||
| rouge (= 2.2.1) | ||
| terminal-table (~> 1.4) | ||
| github-pages-health-check (1.16.1) | ||
| addressable (~> 2.3) | ||
| dnsruby (~> 1.60) | ||
| octokit (~> 4.0) | ||
| public_suffix (~> 3.0) | ||
| typhoeus (~> 1.3) | ||
| html-pipeline (2.11.0) | ||
| activesupport (>= 2) | ||
| nokogiri (>= 1.4) | ||
| http_parser.rb (0.6.0) | ||
| i18n (0.9.5) | ||
| concurrent-ruby (~> 1.0) | ||
| jekyll (3.8.5) | ||
| addressable (~> 2.4) | ||
| colorator (~> 1.0) | ||
| em-websocket (~> 0.5) | ||
| i18n (~> 0.7) | ||
| jekyll-sass-converter (~> 1.0) | ||
| jekyll-watch (~> 2.0) | ||
| kramdown (~> 1.14) | ||
| liquid (~> 4.0) | ||
| mercenary (~> 0.3.3) | ||
| pathutil (~> 0.9) | ||
| rouge (>= 1.7, < 4) | ||
| safe_yaml (~> 1.0) | ||
| jekyll-avatar (0.6.0) | ||
| jekyll (~> 3.0) | ||
| jekyll-coffeescript (1.1.1) | ||
| coffee-script (~> 2.2) | ||
| coffee-script-source (~> 1.11.1) | ||
| jekyll-commonmark (1.3.1) | ||
| commonmarker (~> 0.14) | ||
| jekyll (>= 3.7, < 5.0) | ||
| jekyll-commonmark-ghpages (0.1.5) | ||
| commonmarker (~> 0.17.6) | ||
| jekyll-commonmark (~> 1) | ||
| rouge (~> 2) | ||
| jekyll-default-layout (0.1.4) | ||
| jekyll (~> 3.0) | ||
| jekyll-feed (0.11.0) | ||
| jekyll (~> 3.3) | ||
| jekyll-gist (1.5.0) | ||
| octokit (~> 4.2) | ||
| jekyll-github-metadata (2.12.1) | ||
| jekyll (~> 3.4) | ||
| octokit (~> 4.0, != 4.4.0) | ||
| jekyll-mentions (1.4.1) | ||
| html-pipeline (~> 2.3) | ||
| jekyll (~> 3.0) | ||
| jekyll-optional-front-matter (0.3.0) | ||
| jekyll (~> 3.0) | ||
| jekyll-paginate (1.1.0) | ||
| jekyll-readme-index (0.2.0) | ||
| jekyll (~> 3.0) | ||
| jekyll-redirect-from (0.14.0) | ||
| jekyll (~> 3.3) | ||
| jekyll-relative-links (0.6.0) | ||
| jekyll (~> 3.3) | ||
| jekyll-remote-theme (0.3.1) | ||
| jekyll (~> 3.5) | ||
| rubyzip (>= 1.2.1, < 3.0) | ||
| jekyll-sass-converter (1.5.2) | ||
| sass (~> 3.4) | ||
| jekyll-seo-tag (2.5.0) | ||
| jekyll (~> 3.3) | ||
| jekyll-sitemap (1.2.0) | ||
| jekyll (~> 3.3) | ||
| jekyll-swiss (0.4.0) | ||
| jekyll-theme-architect (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-cayman (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-dinky (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-hacker (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-leap-day (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-merlot (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-midnight (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-minimal (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-modernist (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-primer (0.5.3) | ||
| jekyll (~> 3.5) | ||
| jekyll-github-metadata (~> 2.9) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-slate (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-tactile (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-theme-time-machine (0.1.1) | ||
| jekyll (~> 3.5) | ||
| jekyll-seo-tag (~> 2.0) | ||
| jekyll-titles-from-headings (0.5.1) | ||
| jekyll (~> 3.3) | ||
| jekyll-watch (2.2.1) | ||
| listen (~> 3.0) | ||
| jemoji (0.10.2) | ||
| gemoji (~> 3.0) | ||
| html-pipeline (~> 2.2) | ||
| jekyll (~> 3.0) | ||
| kramdown (1.17.0) | ||
| liquid (4.0.0) | ||
| listen (3.1.5) | ||
| rb-fsevent (~> 0.9, >= 0.9.4) | ||
| rb-inotify (~> 0.9, >= 0.9.7) | ||
| ruby_dep (~> 1.2) | ||
| mercenary (0.3.6) | ||
| mini_portile2 (2.4.0) | ||
| minima (2.5.0) | ||
| jekyll (~> 3.5) | ||
| jekyll-feed (~> 0.9) | ||
| jekyll-seo-tag (~> 2.1) | ||
| minitest (5.11.3) | ||
| multipart-post (2.1.1) | ||
| nokogiri (1.10.3) | ||
| mini_portile2 (~> 2.4.0) | ||
| octokit (4.14.0) | ||
| sawyer (~> 0.8.0, >= 0.5.3) | ||
| pathutil (0.16.2) | ||
| forwardable-extended (~> 2.6) | ||
| public_suffix (3.0.3) | ||
| rb-fsevent (0.10.3) | ||
| rb-inotify (0.10.0) | ||
| ffi (~> 1.0) | ||
| rouge (2.2.1) | ||
| ruby-enum (0.7.2) | ||
| i18n | ||
| ruby_dep (1.5.0) | ||
| rubyzip (1.2.2) | ||
| safe_yaml (1.0.5) | ||
| sass (3.7.4) | ||
| sass-listen (~> 4.0.0) | ||
| sass-listen (4.0.0) | ||
| rb-fsevent (~> 0.9, >= 0.9.4) | ||
| rb-inotify (~> 0.9, >= 0.9.7) | ||
| sawyer (0.8.2) | ||
| addressable (>= 2.3.5) | ||
| faraday (> 0.8, < 2.0) | ||
| terminal-table (1.8.0) | ||
| unicode-display_width (~> 1.1, >= 1.1.1) | ||
| thread_safe (0.3.6) | ||
| typhoeus (1.3.1) | ||
| ethon (>= 0.9.0) | ||
| tzinfo (1.2.5) | ||
| thread_safe (~> 0.1) | ||
| unicode-display_width (1.6.0) | ||
|
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| PLATFORMS | ||
| ruby | ||
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| DEPENDENCIES | ||
| github-pages | ||
| jekyll-feed (~> 0.6) | ||
| minima (~> 2.5) | ||
| tzinfo-data | ||
|
|
||
| BUNDLED WITH | ||
| 2.0.1 |
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| --- | ||
| title: Links | ||
| layout: default | ||
| --- | ||
|
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| ## Useful Software Links | ||
|
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| This is a general to collect a large variety of useful websites, tutorials, and | ||
| libraries. If you have any more to add, feel free to make a pull request. | ||
|
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||
| ### Bash: | ||
| - [Bash Tutorial](http://swcarpentry.github.io/shell-novice/) | ||
| - [Vim Settings](data/vimrc_example) - Recommended `~/.vimrc` settings to use. | ||
|
|
||
| ### Python | ||
| - [Software Carpentry Tutorial](http://swcarpentry.github.io/python-novice-inflammation/) | ||
| - [Codecademy Tutorial](https://www.codecademy.com/learn/python) | ||
| - [Scientific computing in Python](https://github.com/jrjohansson/scientific-python-lectures). First three notebooks: | ||
| - 1- Scientific computing in Python | ||
| - 2- Introduction to Python | ||
| - 3- Numpy | ||
| - [Array broadcasting example](https://stanford.edu/~schmit/cme193/lec/lec5.pdf) - Slide 16 | ||
|
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| ### Git | ||
| Cheat sheets: | ||
| - [Git cheat sheet](https://services.github.com/on-demand/downloads/github-git-cheat-sheet.pdf) | ||
|
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| Visual tools: | ||
| - [Smart Git](http://www.syntevo.com/smartgit/) | ||
| - [Git Kraken](https://www.gitkraken.com) | ||
|
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||
| Caching your GitHub password: | ||
| - [GitHub Help](https://help.github.com/articles/caching-your-github-password-in-git/) | ||
|
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| ### C++ | ||
| Tutorials and references: | ||
| - [IsoCpp](https://isocpp.org/get-started) | ||
| - [LearnCpp](http://www.learncpp.com) | ||
| - [Cplusplus.com](http://www.cplusplus.com/doc/tutorial) | ||
| - [CPP Reference](http://en.cppreference.com) - (complete language and STL reference) | ||
|
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| ### Debuggers: | ||
| - [LLDB Cheat Sheet](https://lldb.llvm.org/lldb-gdb.html) | ||
|
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| ### Intrinsics and assembly: | ||
| - [Intel Intrinsics](https://software.intel.com/sites/landingpage/IntrinsicsGuide/) | ||
| - [Reference Manual](https://www.intel.com/content/dam/www/public/us/en/documents/manuals/64-ia-32-architectures-software-developer-instruction-set-reference-manual-325383.pdf) | ||
|
|
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| ### BLAS/LAPACK | ||
| References: | ||
| - [Quick Guide](http://www.netlib.org/lapack/lug/node145.html) | ||
| - [Full Guide](http://www.netlib.org/lapack/lug) | ||
|
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||
| Implementations: | ||
| - [Intel MKL](https://software.intel.com/en-us/mkl) - Now free! | ||
| - [OpenBLAS](http://www.openblas.net/) | ||
| - [BLIS](https://github.com/flame/blis) | ||
| - [libFLAME](https://github.com/flame/libflame) | ||
|
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| Wrapper libraries: | ||
| - [Armadillo](http://arma.sourceforge.net/) | ||
| - [Eigen](http://eigen.tuxfamily.org/index.php?title=Main_Page) | ||
| - [Boost::uBLAS](http://www.boost.org/doc/libs/1_63_0/libs/numeric/ublas/doc/index.html) | ||
| - [Lapack++](http://lapackpp.sourceforge.net/) | ||
| - [LAWrap](https://github.com/devinamatthews/lawrap) | ||
|
|
||
| ## QM Theory Links | ||
| - [C++ Programming Tutorial in Chemistry](http://sirius.chem.vt.edu/wiki/doku.php?id=crawdad:programming) |
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| # 2019 MolSSI Software Summer School | ||
|
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| This repo contains files for a logistics website for the 2019 MolSSI Software Summer School. | ||
|
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| This website uses the `minima` theme. |
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