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@Rachel-Alcraft Rachel-Alcraft released this 16 Jan 13:39
v1.13.4-linux
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BioModelAnalyzer

BioModelAnalyzer is a user-friendly tool for constructing biological models and verifying them

This version is a prototype for the multi-platform version specially designed for Linux and HPC parallelisation.

Overview

This project can be build as a standalone solution with msbuild on linux or mac.

In Windows

Open the solution BioCheckConsoleMulti.sln

The executable to run will be built in (release or debug):

BioCheckConsoleMulti/bin/Release/netcoreapp3.1/BioCheckConsoleMulti

Mac/Linux

Instructions on installing the dotnet runtime: https://learn.microsoft.com/en-us/dotnet/core/install/linux-ubuntu
Instructions on installing mono: https://www.mono-project.com/docs/getting-started/install/linux/
Run the prepare script
.\PrepareRepositoryNix.sh
Build the project

msbuild BioCheckConsoleMulti.sln /p:Configuration=Release /p:Platform="x64" /t:Rebuild

Simple Example

An example is to call it from the command line like

./BioCheckConsoleMulti -model ToyModelUnstable.json -engine SCM

Further info on WIKI

https://github.com/hallba/BioModelAnalyzer/wiki/LinuxBuild

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