New Evaluating Reference Data for Bulk RNA Deconvolution tutorial

CONTRIBUTORS.yaml

@@ -51,7 +51,7 @@ awspolly:
 
 # our real contributors <3 (please add yourself in alphabetical order)
 
-    
+
 a-asai:
     name: Atsushi Asai
     email: [email protected]
@@ -103,7 +103,7 @@ adairama:
     joined: 2024-12
     location:
       country: SG
-    
+
 
 ahmedhamidawan:
     name: Ahmed Hamid Awan
@@ -507,6 +507,10 @@ Camila-goclowski:
     email: [email protected]
     linkedin: camila-goclowski
 
+carloscheemendonca:
+    name: Carlos Chee Mendonça
+    joined: 2025-01
+
 charitylaw:
     name: Charity Law
     joined: 2018-09
@@ -959,9 +963,9 @@ GokceOGUZ:
     email: [email protected]
     orcid: 0000-0003-1044-7204
     linkedin: gokce-oguz
-    location: 
+    location:
       country: SG
-    
+
 guerler:
     name: Aysam Guerler
     joined: 2017-09
@@ -1784,7 +1788,7 @@ nagoue:
     email: [email protected]
     orcid: 0000-0003-2750-1473
     joined: 2019-07
-    
+
 Najatamk:
     name: Najat Amoukou
     email: [email protected]
@@ -2006,8 +2010,8 @@ paulocilasjr:
     joined: 2024-09
     email: [email protected]
     orcid: 0000-0002-4403-6684
-    affiliations: 
-    - moffitt 
+    affiliations:
+    - moffitt
     twitter: paulocilasjr
 
 paulzierep:
@@ -2097,8 +2101,8 @@ qchiujunhao:
     name: Junhao Qiu
     joined: 2024-02
     orcid: 0009-0005-4322-3401
-    affiliations: 
-    - moffitt 
+    affiliations:
+    - moffitt
     email: [email protected]
 
 Quickbeasts51429:
@@ -2132,7 +2136,7 @@ r1corre:
 
 reid-wagner:
     name: Reid Wagner
-    email: [email protected] 
+    email: [email protected]
     joined: 2024-11
 
 rikeshi:

topics/single-cell/tutorials/bulk-deconvolution-evaluate/workflows/deconv-eval-stage-1-create-data-test.yml

@@ -0,0 +1,33 @@
+- doc: Test outline for deconv-eval-stage-1-create-data
+  job:
+    Metadata:
+      class: Collection
+      collection_type: list
+      elements:
+      - class: File
+        identifier: None 1
+        path: test-data/Metadata_None 1.tabular
+      - class: File
+        identifier: None 2
+        path: test-data/Metadata_None 2.tabular
+      - class: File
+        identifier: None 3
+        path: test-data/Metadata_None 3.tabular
+    Expression Data:
+      class: Collection
+      collection_type: list
+      elements:
+      - class: File
+        identifier: None 1
+        path: test-data/Expression Data_None 1.tabular
+      - class: File
+        identifier: None 2
+        path: test-data/Expression Data_None 2.tabular
+      - class: File
+        identifier: None 3
+        path: test-data/Expression Data_None 3.tabular
+    Awk- actual header (A): BEGIN { print "A_actual\tcell_type" } { print $0 }
+    Awk - infer header (A): BEGIN { print "0\tA_infer\t0" } NR > 1 {print $0 }
+    Awk - actual header (B): BEGIN { print "B_actual\tcell_type" } { print $0 }
+    Awk - infer header (B): BEGIN { print "0\tB_infer\t0" } NR > 1 {print $0 }
+  outputs: {}