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split-fasta: initial commit #173

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split-fasta: initial commit
bernt-matthias Feb 3, 2023
357692e
Merge branch 'main' into split-fasta
bgruening Mar 5, 2024
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9 changes: 9 additions & 0 deletions workflows/fasta_manipulation/split_by_regexp/.dockstore.yml
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version: 1.2
workflows:
- name: main
subclass: Galaxy
publish: true
primaryDescriptorPath: /split_by_regexp.ga
authors:
- name: Matthias Bernt
orcid: 0000-0003-3763-079
7 changes: 7 additions & 0 deletions workflows/fasta_manipulation/split_by_regexp/CHANGELOG.md
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# Changelog

## [0.1] 2023-02-03

### Added

- Initial release.
12 changes: 12 additions & 0 deletions workflows/fasta_manipulation/split_by_regexp/README.md
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Split a FASTA into a collection by using regular expressions and IDs given in a file.

Inputs:

1. A regexp file containing IDs in column 1 and regular expressions in column 2
2. A FASTA file

Output:

A collection containing FASTA files. The collection elements will be named
by the IDs from the regexp file and contain all FASTA entries that match the
corresponding collection.
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