Update nusc_cluster.md

friofry · Jun 12, 2021 · dfa987f · dfa987f
1 parent 5be52ad
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diff --git a/gpu_lib/CMakeLists.txt b/gpu_lib/CMakeLists.txt
@@ -1,5 +1,5 @@
 cmake_minimum_required(VERSION 3.18)
-project(gpu_lib LANGUAGES CUDA)
+project(gpu_lib LANGUAGES CXX CUDA)
 
 set(CMAKE_CXX_STANDARD 14)
 set(CMAKE_CUDA_STANDARD 14)

diff --git a/running_on_nusc_cluster.md b/running_on_nusc_cluster.md
@@ -23,23 +23,31 @@ cd motif_finder_cuda-1.0
 mkdir build
 cd build
 ```
-6. Configure project:
+6. Configure:
+
+* Add to CUDA_COMPILER to path:
+```shell
+export PATH="/opt/shared/nvidia/cuda-10.2.89/bin:$PATH";
+```
+
+* Configure the project:
 ```shell
-~/cmake-3.20.3-linux-x86_64/bin/cmake -DCMAKE_BUILD_TYPE=Release ..
+export CC=gcc-8; export CXX=g++-8; ~/cmake-3.20.3-linux-x86_64/bin/cmake -DCMAKE_CUDA_HOST_COMPILER=/usr/bin/g++-8 -DCUDA_TOOLKIT_ROOT_DIR=/opt/shared/nvidia/cuda-10.2.89/  -DCMAKE_BUILD_TYPE=Release ..
 ```
 
+
 7. Build:
 ```shell
 ~/cmake-3.20.3-linux-x86_64/bin/cmake --build . -j
 ```
 
 8. Run:
 * Copy test data:
-```asm
+```shell
 cp ../motif_finder_gpu/init.ini ../motif_finder_gpu/test_12.fst motif_finder_gpu/
 ```
 * Run:
-```asm
+```shell
 cd motif_finder_gpu
 ./motif_finder_gpu
 ```