── Downloading 11 files for `mimic` ────────────────────────────────────────────────────────────────────────────
• INPUTEVENTS_MV.csv.gz
• LABEVENTS.csv.gz
• MICROBIOLOGYEVENTS.csv.gz
• NOTEEVENTS.csv.gz
• OUTPUTEVENTS.csv.gz
• PATIENTS.csv.gz
• PRESCRIPTIONS.csv.gz
• PROCEDUREEVENTS_MV.csv.gz
• PROCEDURES_ICD.csv.gz
• SERVICES.csv.gz
• TRANSFERS.csv.gz
────────────────────────────────────────────────────────────────────────────────────────────────────────────────
Comparing checksums
── Importing 26 tables for `mimic` ─────────────────────────────────────────────────────────────────────────────
chartevents pa… [===========>-------------------------------------------] 21%Error in setorderv(dat, sort_col) :
some columns are not in the data.table: ITEMID
In addition: Warning message:
Encountered parsing problems for file CHARTEVENTS.csv.gz:
• [102348385, 6]: got '2179-09-18 1' instead of date like %Y-%m-%d
%H:%M:%S
• [102348385, NA]: got '6 columns' instead of 15 columns
> import_src("mimic", "/mnt/d/min/data/icu/mimic-iii/")
── Importing 23 tables for `mimic` ─────────────────────────────────────────────────────────────────────────────
chartevents pa… [===========>-------------------------------------------] 21%Error in setorderv(dat, sort_col) :
some columns are not in the data.table: ITEMID
In addition: Warning message:
Encountered parsing problems for file CHARTEVENTS.csv.gz:
• [102348385, 6]: got '2179-09-18 1' instead of date like %Y-%m-%d
%H:%M:%S
• [102348385, NA]: got '6 columns' instead of 15 columns
ChartEvents cannot be imported