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Giotto v4.2.1 #1098

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Feb 5, 2025
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Giotto v4.2.1 #1098

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720b37a
fix: `identifyTMAcores()` add catch for 0 dim matrices in rbind
jiajic Jan 30, 2025
f43404d
chore: docs
jiajic Feb 5, 2025
67e845a
Merge pull request #1097 from jiajic/suite_dev
jiajic Feb 5, 2025
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2 changes: 1 addition & 1 deletion DESCRIPTION
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@@ -1,6 +1,6 @@
Package: Giotto
Title: Spatial Single-Cell Transcriptomics Toolbox
Version: 4.2.0
Version: 4.2.1
Authors@R: c(
person("Ruben", "Dries", email = "[email protected]",
role = c("aut", "cre"), comment = c(ORCID = "0000-0001-7650-7754")),
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7 changes: 6 additions & 1 deletion NEWS.md
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@@ -1,4 +1,9 @@
# Giotto 4.2.0 (2024/01/17)
# Giotto 4.2.1 (2025/02/04)

## Bug fixes
* fix `identifyTMAcores()` when no overlap relations are found and an `rbind` error is thrown

# Giotto 4.2.0 (2025/01/17)

## Breaking Changes
* Large changes to `createGiottoCosMxObject()` that better reflect NanoString provided outputs.
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1 change: 1 addition & 0 deletions R/spatial_clusters.R
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Expand Up @@ -231,6 +231,7 @@ identifyTMAcores <- function(
# determine sorted pairs of overlaps
apply(MARGIN = 2, sort) |>
t()
if (any(dim(ovlp) == 0)) ovlp <- NULL
return(ovlp)
})
# combine test reps
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