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0.4.0
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@dpryan79 dpryan79 released this 13 Apr 07:55
· 160 commits to master since this release
0.4.0
344b1be
  • Switched to an external htslib. It is currently compatible with htslib versions 1.4 through 1.9 (the latest one at the time of release).
  • Added the --perRead option, as used in https://www.biorxiv.org/content/10.1101/481283v1
  • Removed the --maxDepth option, it's not longer required.
  • Fixed issue #58, the --keepDupes flag now changes --ignoreFlags.
  • Fixed issue #59, the confidence intervals should no longer extend outside of [0, 1].
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