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Releases: csmiller/EMIRGE

Provide new script for default SSU database download and build

09 Nov 20:27
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We have overhauled the way we download and build a cleaned SILVA SSU database for EMIRGE. SILVA is the recommended small subunit rRNA gene database to use for EMIRGE. This is back-ported from Elmar Pruesse's EMIRGE2 code, and replaces the old emirge_download_candidate_db.py with the new emirge_makedb.py.

This new script requires vsearch, as EMIRGE2 is moving to using vsearch in place of usearch.

Maintenance Release

14 Oct 20:00
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Fixes compatibility with BioPython >= 1.67

Fix missing zlib dependency

01 Apr 19:28
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Release to pypi

18 Mar 20:10
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v0.60.2

Bump version: 0.60.3 → 0.60.2

bugfix release

26 Feb 01:33
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  • fixes compatibility issue with pysam >= 0.8.4
  • fixes providing pre-computed mapping file (issue #19)