Protein coverage plot and fasta sequence data support#542

Draft

henninggaertner wants to merge 14 commits intodevfrom

541-protein-coverage-visualization

Commits on Nov 14, 2024

Add fasta import, primitive peptide - protein sequence alignment, preliminary coverage bar plot
henninggaertner
committed

Commits on Nov 21, 2024

Add new pickle disk operator interface, add k-mer dictionary generation and storing, annihilate protein coverage tests
henninggaertner
committed

Commits on Nov 26, 2024

Add peptide sequences as hoverable rectangles in the protein coverage plot, space optimization
henninggaertner
committed

Commits on Nov 27, 2024

Add sample selection, coloring based on intensities to the protein coverage plot
henninggaertner
committed

Commits on Nov 28, 2024

Commits on Dec 2, 2024

Merge branch 'dev' into 541-protein-coverage-visualization
henninggaertner
committed

Commits on Dec 9, 2024

New build_plot function for protein coverage plot: using subplots, color min-max-normalization on sample-level
henninggaertner
committed

Commits on Dec 10, 2024

Separate the sequencing depth bar charts for each sample
henninggaertner
committed

Commits on Dec 12, 2024

Reformatting and refactoring
henninggaertner
committed

Commits on Dec 16, 2024

Add color interpolation, combine peptides and sequence depth subplots
henninggaertner
committed

Commits on Dec 17, 2024

Add grouping via metadata and aggregation via median, improve logging
henninggaertner
committed

Commits on Jan 13, 2025