JavaPermutationTools, v2.6.0

[2.6.0] - 2021-04-02

Added

• Added the Permutation.Mechanic.set(Permutation, int[], int, int, int) method.

Changed

• Refactored the SequenceDistanceMeasurer and SequenceDistanceMeasurerDouble interfaces
  into a hierarchy, eliminated an abstract base class made obsolete by that change, and
  changed all sequence distances in the library to use the new hierarchy. This is a non-breaking
  change, as the only thing removed was a package-private abstract class, and the
  change to the SequenceDistanceMeasurer interface was done in such a way that all inherited
  methods have default implementations.
• Refactored the PermutationDistanceMeasurer, PermutationDistanceMeasurerDouble,
  NormalizedPermutationDistanceMeasurer, and NormalizedPermutationDistanceMeasurerDouble
  interfaces, and all of the classes that implement them, to move default implementations
  from an abstract base class into the appropriate subinterfaces in hierarchy. This is a
  non-breaking change, as the only thing removed was a package-private abstract class, and the
  changes to interfaces were done in such a way that all inherited methods have default
  implementations.