STAR v2.7.10a overhaul
STARsolo wrapper scripts v3.0 - made uniform, fixed bugs, updated README. Multimapper counting (EM) is now on by default, but normal Cell Ranger output is still produced; EM matrix is available as an extra file in /raw
directories.
seqtk
and samtools
are now required for a 10X-auto script by default.
Docker and Singularity images will be added soon.