A package to load tomograms and subtomograms from different sources into a PyTorch DataLoader class.
The DiskDataLoader and DiskDataset classes were initially developed for Affinity-VAE by Marjan Famili (@marjanfamili), Jola Mirecka (@jolaem) and Camila Rangel-Smith (@crangelsmith). These authors have also prepared and curated the corresponding test data.
python -m venv env
source env/bin/activate
python -m pip install --upgrade pip
python -m pip install cakedFrom source:
git clone https://github.com/alan-turing-institute/CAKED
cd CAKED
python -m pip install .See CONTRIBUTING.md for instructions on how to contribute.
Distributed under the terms of the MIT license.
This packaged was based on this very useful and well built project template.