Skip to content

Conversation

@shadizaheri
Copy link
Collaborator

This PR introduces the BarcodeExtractor workflow which extracts barcodes from BAM files and creates a movie_name.barcode for each sample. The following changes were made:

  • Added BarcodeExtractor.wdl to define the workflow and task.

The BarcodeExtractor workflow:

  • Takes an input BAM file, sample ID, and movie name.
  • Extracts the barcode using a Python script.
  • Outputs the barcode and movie_name.barcode for each sample.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant