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birdingman0626 / STAR-Cross Public

forked from alexdobin/STAR

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STAR-Cross 0.0.1: release automation, genomeGenerate perf (#2687), WASP-in-SAM (#2617), CodeQL fix#8

Merged

birdingman0626 merged 5 commits into

mainbirdingman0626/STAR-Cross:mainfrom

release/v0.0.1birdingman0626/STAR-Cross:release/v0.0.1Copy head branch name to clipboard

Jun 29, 2026

Conversation Commits5 (5)Checks Files changed

Merged

STAR-Cross 0.0.1: release automation, genomeGenerate perf (#2687), WASP-in-SAM (#2617), CodeQL fix#8
birdingman0626 merged 5 commits into
mainfrom
release/v0.0.1

Commits

Commits on Jun 29, 2026

chore(release): STAR-Cross 0.0.1 versioning, main branch, CodeQL third-party exclusion

birdingman0626
and
claude
committed
feat: allow WASP vW:i tag in SAM output (upstream PR #2617)

birdingman0626
and
claude
committed
perf: multicore genomeGenerate suffix-array build (upstream PR #2687)

birdingman0626
and
claude
committed
docs: STAR-Cross 0.0.1, CRAM/big-endian/ARM, genomeGenerate perf, WASP-in-SAM

birdingman0626
and
claude
committed
fix(win): use signed loop indices in OpenMP parallel-for (MSVC OpenMP 2.0)

birdingman0626
and
claude
committed

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