Skip to content

Updated to match QAP 1.0.8 variable names #3

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
alexlicohen wants to merge 1 commit into
base: master
Choose a base branch
from
Open

Updated to match QAP 1.0.8 variable names #3

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
14 changes: 9 additions & 5 deletions default_pipeline.yml
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,10 +1,14 @@
# how many participants to run per workflow
num_subjects_per_bundle: 1
# name for this run
pipeline_name: QAP_bids_app_default

# how many processors you wish to use in the run
num_processors: 1
memory_allocated: 2

pipeline_name: QAP_bids_app_default
# how many participants to run per workflow
num_participants_at_once: 1

# the amount of memory (in GB) to allocate to each participant
memory_allocated_per_participant: 2

# which resource manager being used, if any
resource_manager: None
Expand All @@ -17,7 +21,7 @@ working_directory: /scratch

# path to skull template
# only required if you have anatomical scans
template_skull_for_anat: /qap_resources/qap_templates/MNI152_T1_2mm.nii.gz
template_head_for_anat: /qap_resources/qap_templates/MNI152_T1_2mm.nii.gz

# exclude zero-value voxels from the background of the anatomical scan
# this is meant for images that have been manually altered (ex. ears removed
Expand Down