Jain/prospero #212

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Draft

Jannetty wants to merge 28 commits into feature/add-flystemcells from jain/prospero

Draft

Jain/prospero #212

Added test for step function in PottsModuleFlyGMCDiffferentiationTest

GitHub Actions / checkstyle completed Apr 27, 2026 in 1s

reviewdog [checkstyle] report

reported by reviewdog 🐶

Findings (83)

test/arcade/potts/sim/Potts3DTest.java|1| File length is 2,371 lines (max allowed is 2,000).
test/arcade/potts/sim/Potts3DTest.java|211 col 18| ';' is followed by whitespace.
test/arcade/potts/sim/PottsSimulationTest.java|38 col 11| Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]$'.
test/arcade/potts/env/location/PottsLocation3DTest.java|305 col 9| Avoid nested blocks.
test/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivisionTest.java|19 col 9| 'VARIABLE_DEF' should be separated from previous line.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|65 col 11| Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]$'.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|703 col 41| 'module' hides a field.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|743 col 41| 'module' hides a field.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|1221 col 7| Comment matches to-do format 'TODO:'.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|1279 col 41| 'module' hides a field.
test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java|1296 col 41| 'module' hides a field.
test/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiationTest.java|68 col 11| Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]$'.
src/arcade/potts/sim/output/PottsOutputSerializer.java|282 col 5| Missing a Javadoc comment.
src/arcade/potts/sim/output/PottsOutputSaver.java|28 col 5| Missing a Javadoc comment.
src/arcade/potts/sim/PottsSimulation.java|33 col 5| Missing a Javadoc comment.
src/arcade/potts/sim/PottsSimulation.java|292 col 5| Missing a Javadoc comment.
src/arcade/potts/sim/PottsSeries.java|215 col 15| Comment matches to-do format 'TODO:'.
src/arcade/potts/vis/PottsVisualization.java|174 col 5| Method create3DDrawers length is 277 lines (max allowed is 150).
src/arcade/potts/agent/cell/PottsCellFlyStem.java|14 col 1| Missing a Javadoc comment.
src/arcade/potts/agent/cell/PottsCellFlyStem.java|62 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/cell/PottsCellFlyStem.java|94 col 5| Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'setApicalAxis' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'setApicalAxis' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/cell/PottsCellFlyStem.java|94 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/cell/PottsCellFlyStem.java|115| Line is longer than 100 characters (found 151).
src/arcade/potts/agent/cell/PottsCellFlyStem.java|115| Line is longer than 120 characters (found 151).
src/arcade/potts/agent/cell/PottsCellFlyStem.java|118 col 5| Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'make' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'make' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/cell/PottsCellFlyStem.java|118 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/cell/PottsCellFly.java|7 col 3| Comment matches to-do format 'TODO:'.
src/arcade/potts/agent/cell/PottsCellFly.java|19 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/cell/PottsCellFactory.java|222| Line is longer than 100 characters (found 110).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|34 col 1| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|72 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|95 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|97 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|99 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|143| Line is longer than 100 characters (found 101).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|207 col 37| Expression can be simplified.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|209 col 54| Expression can be simplified.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|216 col 5| Class 'PottsModuleFlyStemProliferation' looks like designed for extension (can be subclassed), but the method 'updateVolumeBasedGrowthRate' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsModuleFlyStemProliferation' final or making the method 'updateVolumeBasedGrowthRate' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|216 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|217 col 21| Expression can be simplified.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|262 col 5| Class 'PottsModuleFlyStemProliferation' looks like designed for extension (can be subclassed), but the method 'updateGrowthRateBasedOnOtherNBs' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsModuleFlyStemProliferation' final or making the method 'updateGrowthRateBasedOnOtherNBs' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|262 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|272 col 16| Name 'Kn' must match pattern '^([a-z][a-zA-Z0-9]|)$'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|273 col 16| Name 'Npn' must match pattern '^([a-z][a-zA-Z0-9]*|)$'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|322 col 16| Name 'apical_axis' must match pattern '^([a-z][a-zA-Z0-9]|_)$'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|364 col 22| Expected @param tag for 'stemType'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|364 col 62| Expected @param tag for 'rotatedNormalVector'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|388 col 17| Conditional logic can be removed.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|405| Line is longer than 100 characters (found 105).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|409| Line is longer than 100 characters (found 113).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|411 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|470| First sentence should end with a period.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|501| First sentence should end with a period.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|580 col 20| Expected @param tag for 'daughterProspero'.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|608| Line is longer than 100 characters (found 131).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|608| Line is longer than 120 characters (found 131).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|621| Line is longer than 100 characters (found 131).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|621| Line is longer than 120 characters (found 131).
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|657| First sentence should end with a period.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|712 col 5| Class 'PottsModuleFlyStemProliferation' looks like designed for extension (can be subclassed), but the method 'getNBsInSimulation' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsModuleFlyStemProliferation' final or making the method 'getNBsInSimulation' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|712 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyStemProliferation.java|717 col 13| 'if' construct must use '{}'s.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|7 col 31| Using the '.' form of import should be avoided - arcade.potts.agent.cell..
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|20 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|23 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|113 col 5| Class 'PottsModuleFlyGMCDifferentiation' looks like designed for extension (can be subclassed), but the method 'updateGrowthRate' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsModuleFlyGMCDifferentiation' final or making the method 'updateGrowthRate' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|113 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|130 col 21| 'if' construct must use '{}'s.
src/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiation.java|133 col 21| 'if' construct must use '{}'s.
src/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivision.java|7 col 8| Unused import - arcade.potts.agent.cell.PottsCellFlyNeuron.
src/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivision.java|72 col 5| Class 'PottsModuleProliferationVolumeBasedDivision' looks like designed for extension (can be subclassed), but the method 'updateCellVolumeBasedGrowthRate' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsModuleProliferationVolumeBasedDivision' final or making the method 'updateCellVolumeBasedGrowthRate' static/final/abstract/empty, or adding allowed annotation for the method.
src/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivision.java|72 col 5| Missing a Javadoc comment.
src/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivision.java|73 col 16| Name 'Ka' must match pattern '^([a-z][a-zA-Z0-9]|_)$'.
src/arcade/core/gui/GUI.java|374 col 5| Class XMLFileFilter should be declared as final.
src/arcade/patch/sim/output/PatchOutputSerializer.java|158 col 15| Comment matches to-do format 'TODO:'.
src/arcade/patch/agent/module/PatchModuleMigration.java|62 col 23| Comment matches to-do format 'TODO:'.
src/arcade/patch/agent/module/PatchModuleProliferation.java|128 col 23| Comment matches to-do format 'TODO:'.
setup/stem.xml|1| File does not end with a newline.
setup/setup.xml|1| File does not end with a newline.
setup/neuron.xml|1| File does not end with a newline.
setup/1.xml|1| File does not end with a newline.
setup/gmc.xml|1| File does not end with a newline.
setup/nb.xml|1| File does not end with a newline.

Filtered Findings (0)

Annotations

Check failure on line 1 in test/arcade/potts/sim/Potts3DTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/sim/Potts3DTest.java#L1 <com.puppycrawl.tools.checkstyle.checks.sizes.FileLengthCheck>

File length is 2,371 lines (max allowed is 2,000).

Raw output


            /github/workspace/./test/arcade/potts/sim/Potts3DTest.java:1:0: error: File length is 2,371 lines (max allowed is 2,000). (com.puppycrawl.tools.checkstyle.checks.sizes.FileLengthCheck)

Check failure on line 211 in test/arcade/potts/sim/Potts3DTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/sim/Potts3DTest.java#L211 <com.puppycrawl.tools.checkstyle.checks.whitespace.EmptyForIteratorPadCheck>

';' is followed by whitespace.

Raw output


            /github/workspace/./test/arcade/potts/sim/Potts3DTest.java:211:18: error: ';' is followed by whitespace. (com.puppycrawl.tools.checkstyle.checks.whitespace.EmptyForIteratorPadCheck)

Check failure on line 38 in test/arcade/potts/sim/PottsSimulationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/sim/PottsSimulationTest.java#L38 <com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck>

Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'.

Raw output


            /github/workspace/./test/arcade/potts/sim/PottsSimulationTest.java:38:11: error: Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'. (com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck)

Check failure on line 305 in test/arcade/potts/env/location/PottsLocation3DTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/env/location/PottsLocation3DTest.java#L305 <com.puppycrawl.tools.checkstyle.checks.blocks.AvoidNestedBlocksCheck>

Avoid nested blocks.

Raw output


            /github/workspace/./test/arcade/potts/env/location/PottsLocation3DTest.java:305:9: error: Avoid nested blocks. (com.puppycrawl.tools.checkstyle.checks.blocks.AvoidNestedBlocksCheck)

Check failure on line 19 in test/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivisionTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivisionTest.java#L19 <com.puppycrawl.tools.checkstyle.checks.whitespace.EmptyLineSeparatorCheck>

'VARIABLE_DEF' should be separated from previous line.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleProliferationVolumeBasedDivisionTest.java:19:9: error: 'VARIABLE_DEF' should be separated from previous line. (com.puppycrawl.tools.checkstyle.checks.whitespace.EmptyLineSeparatorCheck)

Check failure on line 65 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L65 <com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck>

Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:65:11: error: Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'. (com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck)

Check failure on line 703 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L703 <com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck>

'module' hides a field.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:703:41: error: 'module' hides a field. (com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck)

Check failure on line 743 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L743 <com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck>

'module' hides a field.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:743:41: error: 'module' hides a field. (com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck)

Check failure on line 1221 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L1221 <com.puppycrawl.tools.checkstyle.checks.TodoCommentCheck>

Comment matches to-do format 'TODO:'.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:1221:7: error: Comment matches to-do format 'TODO:'. (com.puppycrawl.tools.checkstyle.checks.TodoCommentCheck)

Check failure on line 1279 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L1279 <com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck>

'module' hides a field.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:1279:41: error: 'module' hides a field. (com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck)

Check failure on line 1296 in test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java#L1296 <com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck>

'module' hides a field.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyStemProliferationTest.java:1296:41: error: 'module' hides a field. (com.puppycrawl.tools.checkstyle.checks.coding.HiddenFieldCheck)

Check failure on line 68 in test/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiationTest.java

github-actions / checkstyle

[checkstyle] test/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiationTest.java#L68 <com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck>

Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'.

Raw output


            /github/workspace/./test/arcade/potts/agent/module/PottsModuleFlyGMCDifferentiationTest.java:68:11: error: Name 'EPSILON' must match pattern '^[a-z][a-zA-Z0-9]*$'. (com.puppycrawl.tools.checkstyle.checks.naming.MemberNameCheck)

Check failure on line 282 in src/arcade/potts/sim/output/PottsOutputSerializer.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/sim/output/PottsOutputSerializer.java#L282 <com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocTypeCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/sim/output/PottsOutputSerializer.java:282:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocTypeCheck)

Check failure on line 28 in src/arcade/potts/sim/output/PottsOutputSaver.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/sim/output/PottsOutputSaver.java#L28 <com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/sim/output/PottsOutputSaver.java:28:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck)

Check failure on line 33 in src/arcade/potts/sim/PottsSimulation.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/sim/PottsSimulation.java#L33 <com.puppycrawl.tools.checkstyle.checks.javadoc.JavadocVariableCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/sim/PottsSimulation.java:33:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.JavadocVariableCheck)

Check failure on line 292 in src/arcade/potts/sim/PottsSimulation.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/sim/PottsSimulation.java#L292 <com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/sim/PottsSimulation.java:292:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck)

Check failure on line 215 in src/arcade/potts/sim/PottsSeries.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/sim/PottsSeries.java#L215 <com.puppycrawl.tools.checkstyle.checks.TodoCommentCheck>

Comment matches to-do format 'TODO:'.

Raw output


            /github/workspace/./src/arcade/potts/sim/PottsSeries.java:215:15: error: Comment matches to-do format 'TODO:'. (com.puppycrawl.tools.checkstyle.checks.TodoCommentCheck)

Check failure on line 174 in src/arcade/potts/vis/PottsVisualization.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/vis/PottsVisualization.java#L174 <com.puppycrawl.tools.checkstyle.checks.sizes.MethodLengthCheck>

Method create3DDrawers length is 277 lines (max allowed is 150).

Raw output


            /github/workspace/./src/arcade/potts/vis/PottsVisualization.java:174:5: error: Method create3DDrawers length is 277 lines (max allowed is 150). (com.puppycrawl.tools.checkstyle.checks.sizes.MethodLengthCheck)

Check failure on line 14 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L14 <com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocTypeCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:14:1: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocTypeCheck)

Check failure on line 62 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L62 <com.puppycrawl.tools.checkstyle.checks.javadoc.JavadocVariableCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:62:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.JavadocVariableCheck)

Check failure on line 94 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L94 <com.puppycrawl.tools.checkstyle.checks.design.DesignForExtensionCheck>

Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'setApicalAxis' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'setApicalAxis' static/final/abstract/empty, or adding allowed annotation for the method.

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:94:5: error: Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'setApicalAxis' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'setApicalAxis' static/final/abstract/empty, or adding allowed annotation for the method. (com.puppycrawl.tools.checkstyle.checks.design.DesignForExtensionCheck)

Check failure on line 94 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L94 <com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck>

Missing a Javadoc comment.

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:94:5: error: Missing a Javadoc comment. (com.puppycrawl.tools.checkstyle.checks.javadoc.MissingJavadocMethodCheck)

Check warning on line 115 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L115 <LineLength>

Line is longer than 100 characters (found 151).

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:115:0: warning: Line is longer than 100 characters (found 151). (LineLength)

Check failure on line 115 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L115 <LineLengthTest>

Line is longer than 120 characters (found 151).

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:115:0: error: Line is longer than 120 characters (found 151). (LineLengthTest)

Check failure on line 118 in src/arcade/potts/agent/cell/PottsCellFlyStem.java

github-actions / checkstyle

[checkstyle] src/arcade/potts/agent/cell/PottsCellFlyStem.java#L118 <com.puppycrawl.tools.checkstyle.checks.design.DesignForExtensionCheck>

Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'make' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'make' static/final/abstract/empty, or adding allowed annotation for the method.

Raw output


            /github/workspace/./src/arcade/potts/agent/cell/PottsCellFlyStem.java:118:5: error: Class 'PottsCellFlyStem' looks like designed for extension (can be subclassed), but the method 'make' does not have javadoc that explains how to do that safely. If class is not designed for extension consider making the class 'PottsCellFlyStem' final or making the method 'make' static/final/abstract/empty, or adding allowed annotation for the method. (com.puppycrawl.tools.checkstyle.checks.design.DesignForExtensionCheck)

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