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Add DIG open data for analysis data #2613

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31 changes: 31 additions & 0 deletions datasets/dig-open-analysis-data.yaml
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Name: Knowledge Portal Network Bottom-line Genetic Associations
Description: At the Knowledge Portal Network, we aggregate and analyze genetic association results for a wide range of diseases and traits. For any given disease, a large number of individual genetic association datasets may have been generated. To make these results more interpretable, we meta-analyze all datasets for each phenotype, using a method that we term "bottom-line integrative analysis". Here we provide the bottom-line summary statistic files for public download.
Documentation: https://kp4cd.org/bottom-line_associations
Contact: [email protected]
ManagedBy: Jason Flannick lab, Broad Institute of MIT and Harvard
UpdateFrequency: Three times per year
Tags:
- genome wide association study
License: https://a2f.hugeamp.org/policies.html
Citation: "Knowledge Portal Network Bottom-line Genetic Associations for [PHENOTYPE] were accessed on [DATE] at registry.opendata.aws/[dataset]"
Resources:
- Description: Knowledge Portal Bottom-line Genetic Associations
ARN: arn:aws:s3:::dig-open-bottom-line-analysis
Region: us-east-1
Type: S3 Bucket
DataAtWork:
Tutorials:
- Title: "Tutorial: Use cases for the Knowledge Portal Network bottom-line genetic associations"
URL: https://kp4cd.org/bottom-line_tutorial
AuthorName: Jason Flannick
AuthorURL: https://www.flannicklab.org/
Publications:
- Title: "The Type 2 Diabetes Knowledge Portal: An open access genetic resource dedicated to type 2 diabetes and related traits"
URL: https://www.sciencedirect.com/science/article/pii/S1550413123000797?
AuthorName: Costanzo MC, von Grotthuss M, Massung J, Jang D, Caulkins L, Koesterer R, et al.
- Title: "Leveraging type 1 diabetes human genetic and genomic data in the T1D knowledge portal"
URL: https://journals.plos.org/plosbiology/article?id=10.1371/journal.pbio.3002233
AuthorName: Kudtarkar P, Costanzo MC, Sun Y, Jang D, Koesterer R, Mychaleckyj JC, et al.
- Title: "Cardiovascular Disease Knowledge Portal: A Community Resource for Cardiovascular Disease Research"
URL: https://www.ahajournals.org/doi/10.1161/CIRCGEN.123.004181?
AuthorName: Costanzo MC, Roselli C, Brandes M, Duby M, Hoang Q, Jang D, et al.