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WenjieDu · Jul 26, 2024 · b49ff45 · b49ff45
1 parent fce7b85
commit b49ff45
Showing 1 changed file with 4 additions and 11 deletions.
diff --git a/.github/workflows/testing_daily.yml b/.github/workflows/testing_daily.yml
@@ -37,6 +37,8 @@ jobs:
 
             - name: Fetch the test environment details
               run: |
+                  # many libs not compatible with numpy 2.0. Note 3.12 requests for numpy>=2.0. fix pandas version to avoid installing pandas 2.0, the same reason with numpy
+                  conda install -c conda-forge numpy=1.24 pandas=1.5
                   which python
                   conda info
                   conda list
@@ -50,18 +52,9 @@ jobs:
 
             - name: Test with pytest
               run: |
-                  # run tests separately here due to Segmentation Fault in test_clustering when run all in
-                  # one command with `pytest` on MacOS. Bugs not caught, so this is a trade-off to avoid SF.
-                  python tests/global_test_config.py
                   rm -rf testing_results && rm -rf tests/__pycache__ && rm -rf tests/*/__pycache__
-                  python -m pytest -rA tests/classification/* -s -n auto --cov=pypots --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/imputation/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/clustering/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/forecasting/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/optim/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/data/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/utils/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
-                  python -m pytest -rA tests/cli/* -s -n auto --cov=pypots --cov-append --dist=loadgroup --cov-config=.coveragerc
+                  python tests/global_test_config.py
+                  python -m pytest -rA tests/*/* -s -n auto --cov=pypots --dist=loadgroup --cov-config=.coveragerc
 
             - name: Generate the LCOV report
               run: |