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Syntax changes: Fix trace_report_suffix and update doi handling #4

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Syntax changes: Fix trace_report_suffix and update doi handling #4

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7 changes: 5 additions & 2 deletions nextflow.config
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Original file line number Diff line number Diff line change
Expand Up @@ -80,7 +80,9 @@ params {
show_hidden = false
version = false
pipelines_testdata_base_path = 'https://raw.githubusercontent.com/nf-core/test-datasets/'
trace_report_suffix = new java.util.Date().format( 'yyyy-MM-dd_HH-mm-ss')// Config options
trace_report_suffix = new java.util.Date().format( 'yyyy-MM-dd_HH-mm-ss')

// Config options
config_profile_name = null
config_profile_description = null

Expand Down Expand Up @@ -312,7 +314,8 @@ validation {
\033[0;35m nf-core/scnanoseq ${manifest.version}\033[0m
-\033[2m----------------------------------------------------\033[0m-
"""
afterText = """${manifest.doi ? "\n* The pipeline\n" : ""}${manifest.doi.tokenize(",").collect { " https://doi.org/${it.trim().replace('https://doi.org/','')}"}.join("\n")}${manifest.doi ? "\n" : ""}
afterText = """${manifest.doi ? "\n* The pipeline\n" : ""}${manifest.doi.tokenize(",").collect { doi -> " https://doi.org/${doi.trim().replace('https://doi.org/','')}"}.join("\n")}${manifest.doi ? "\n" : ""}

* The nf-core framework
https://doi.org/10.1038/s41587-020-0439-x

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