Search results

Repeat runs do not produce reproducible results

Status: Open.

#18 In TrinityCTAT/CTAT-LR-fusion;

· calizilla opened on Feb 20, 2026

user defined thresholds for promiscuity

Status: Open.

#16 In TrinityCTAT/CTAT-LR-fusion;

· Puputnik opened on Oct 10, 2025

Some fusions detected in subsampled reads are missing when using full dataset in ctat-LR-fusion

Status: Open.

#15 In TrinityCTAT/CTAT-LR-fusion;

· CyberGypsy6324 opened on Aug 26, 2025

CTAT-LR-fusion apparently not respecting --min_num_LR

Status: Open.

#14 In TrinityCTAT/CTAT-LR-fusion;

· graemefox opened on Jul 25, 2025

Missing fusion_junc_reads.sam

Status: Open.

#13 In TrinityCTAT/CTAT-LR-fusion;

· dpmccabe opened on Jul 24, 2025

Support extended CIGAR strings

Status: Open.

#12 In TrinityCTAT/CTAT-LR-fusion;

· dpmccabe opened on Jul 17, 2025

Leveraging CB and UB tags in the input vs read name augmentation

Status: Open.

#9 In TrinityCTAT/CTAT-LR-fusion;

· aganezov opened on Jan 15, 2025

Issue with CTAT-LR-fusion visualization

Status: Open.

#6 In TrinityCTAT/CTAT-LR-fusion;

· apsteinberg opened on Dec 20, 2024

CTAT-LR "rightfq" and "leftfq" args don't support lists of filepaths, but FusionInspector does

Status: Open.

#3 In TrinityCTAT/CTAT-LR-fusion;

· ljwoods2 opened on Jun 21, 2024

if snapped, splice type not adjusted

Status: Open.

#2 In TrinityCTAT/CTAT-LR-fusion;

· brianjohnhaas opened on Feb 10, 2024

include coding region effect in output

Status: Open.

#1 In TrinityCTAT/CTAT-LR-fusion;

· brianjohnhaas opened on Jan 9, 2024