Skip to content

Commit

Permalink
✨ Add WSI processing to EngineABC (#737)
Browse files Browse the repository at this point in the history
Implements cache mode for processing using EngineABC. Cache_mode saves intermediate results to zarr file which can be converted to AnnotationStore. Full WSI pipeline needs to be implemented for Engines inheriting the base class.

The output of models should be a dictionary according to the new Engine design.

---------

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Shan E Ahmed Raza <[email protected]>
  • Loading branch information
3 people authored Apr 26, 2024
1 parent 0bcf27d commit 466d005
Show file tree
Hide file tree
Showing 8 changed files with 1,155 additions and 314 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/mypy-type-check.yml
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ on:
push:
branches: [ develop, pre-release, master, main ]
pull_request:
branches: [ develop, pre-release, master, main ]
branches: [ develop, pre-release, master, main, dev-define-engines-abc ]

jobs:

Expand Down
Loading

0 comments on commit 466d005

Please sign in to comment.