0.28.0

Changes:

• 24baecb Java/Spark 0.28.0 (#644)
• 8138ef8 Update Embedded to 2.19 (#638)
• eeb71ef Handle resume ingestion for annotation VCFs (#643)
• 128d736 Only clear non-empty buffers during ingestion (#641)
• 9530e07 Migrate macOS CI to GitHub Actions (#639)

This list of changes was auto generated.

0.26.7

Changes:

• 91c5846 Java/Spark 0.26.7 (#642)
• f1c4711 Reduce memory usage and improve perf when reading VCF headers (#631) (#633)
• 07aa8f4 Fix CI on Release 0.26 series (#634)
• d47c323 TileDB-VCF 0.26.6 (#624)
• 90e9047 Java/Spark 0.26.5 (#621)
• cb19385 Load VCF headers when required for in-memory exports (#619) (#620)
• 6344047 Java/Spark 0.26.4 (#617)
• 1275090 In-memory export of VCF info flags (#613) (#615)
• c988e4a Variant Stats Direct Interface with IAF column (#597) (#614)
• fa9095d Merge pull request #611 from TileDB-Inc/adamwenocur/sc-36396/backport

See More

• 2b70203 Java/Spark 0.26.3
• b031017 TileDB 2.17.4
• b803949 Merge pull request #608 from TileDB-Inc/adamwenocur/sc-35998/java
• c9ec185 Java/Spark 0.26.2
• 58ee064 Merge pull request #607 from TileDB-Inc/adamwenocur/sc-35998/update-backport
• e81dcc7 TileDB 2.17.3
• e401615 Handle '=' in tiledb config values (#605) (#606)
• 2851b1b Allow calls with missing genotypes to pass the IAF filter (#602) (#604)
• 762907a Allow ref calls to pass IAF filter (#599) (#600)
• 6efa04d Sort reads during sample delete (#593) (#595)
• 1e9c55d Merge pull request #590 from TileDB-Inc/adamwenocur/sc-34782/update-java
• 6029e6e Java/Spark 0.26.1
• 1fae8df Iterate over polyploid calls (#582) (#584)
• f6ad8fb Add retry on VFS read error (#588) (#589)
• 47604a2 TileDB 2.17.1 (#585) (#586)
• 3fb0c8b Pin setuptools_scm<8.0.0 to build arrow from source in Dockerfile (#581) (#587)

This list of changes was auto generated.

0.27.1

Changes:

• 9177462 Java/Spark 0.27.1 (#640)
• e258193 [Backport release-0.27] Embedded 2.18.3 (#637) [ #635 ]
• 3e7e9a1 Reduce memory usage and improve perf when reading VCF headers (#631) (#632)

This list of changes was auto generated.

0.27.0

Changes:

• 7c10e3a TileDB 2.18.2 (#622) (#627)

0.26.6

Changes:

• d47c323 TileDB-VCF 0.26.6 with TileDB 2.17.5 (#624)

This list of changes was auto generated.

0.26.5

Changes:

• cb19385 Load VCF headers when required for in-memory exports (#619) (#620)

This list of changes was auto generated.

0.26.4

Changes:

• 6344047 Java/Spark 0.26.4 (#617)
• 1275090 In-memory export of VCF info flags (#613) (#615)
• c988e4a Variant Stats Direct Interface with IAF column (#597) (#614)
• fa9095d Merge pull request #611 from TileDB-Inc/adamwenocur/sc-36396/backport

This list of changes was auto generated.

0.26.3

Changes:

• 2b70203 Java/Spark 0.26.3
• b031017 TileDB 2.17.4

This list of changes was auto generated.

0.26.2

Changes:

• c9ec185 Java/Spark 0.26.2
• e81dcc7 TileDB 2.17.3
• e401615 Handle '=' in tiledb config values (#605) (#606)
• 2851b1b Allow calls with missing genotypes to pass the IAF filter (#602) (#604)
• 762907a Allow ref calls to pass IAF filter (#599) (#600)
• 6efa04d Sort reads during sample delete (#593) (#595)
• 1e9c55d Merge pull request #590 from TileDB-Inc/adamwenocur/sc-34782/update-java

This list of changes was auto generated.

0.26.1

Changes:

• 6029e6e Java/Spark 0.26.1
• 1fae8df Iterate over polyploid calls (#582) (#584)
• f6ad8fb Add retry on VFS read error (#588) (#589)
• 47604a2 TileDB 2.17.1 (#585) (#586)
• 3fb0c8b Pin setuptools_scm<8.0.0 to build arrow from source in Dockerfile (#581) (#587)

This list of changes was auto generated.