TileDB 2.18.2 (#622) (#627)

* Embedded 2.18.2

* Update java/spark for version 0.27.0

Co-authored-by: Adam Wenocur <[email protected]>

Author: github-actions[bot]

.azure-pipelines.yml

@@ -17,31 +17,31 @@ stages:
       strategy:
         matrix:
           linux:
-            imageName: 'ubuntu-20.04'
+            imageName: 'ubuntu-22.04'
             python.version: '3.x'
             CXX: g++
             BUILD_PYTHON_API: ON
             BUILD_SPARK_API: ON
             DOWNLOAD_TILEDB_PREBUILT: ON
             ARTIFACT_NAME: linux
           linux_tiledb_source_build:
-            imageName: 'ubuntu-20.04'
+            imageName: 'ubuntu-22.04'
             python.version: '3.x'
             CXX: g++
             BUILD_PYTHON_API: OFF
             BUILD_SPARK_API: OFF
             DOWNLOAD_TILEDB_PREBUILT: OFF
             ARTIFACT_NAME: linux_tiledb_source_build
           macos:
-            imageName: 'macOS-11'
+            imageName: 'macOS-12'
             python.version: '3.7'
             CXX: clang++
             BUILD_PYTHON_API: ON
             BUILD_SPARK_API: ON
             DOWNLOAD_TILEDB_PREBUILT: ON
             #SDKROOT: '/Applications/Xcode_10.3.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk'
             ARTIFACT_NAME: macos
-            MACOSX_DEPLOYMENT_TARGET: '10.15'
+            MACOSX_DEPLOYMENT_TARGET: '11'
       pool:
         vmImage: $(imageName)
       steps:
@@ -85,19 +85,19 @@ stages:
         strategy:
           matrix:
             linux:
-              imageName: 'ubuntu-20.04'
+              imageName: 'ubuntu-22.04'
               python.version: '3.x'
               CXX: g++
               BUILD_PYTHON_API: ON
               BUILD_SPARK_API: ON
             mac:
-              imageName: 'macOS-11'
+              imageName: 'macOS-12'
               python.version: '3.7'
               CXX: clang++
               BUILD_PYTHON_API: ON
               BUILD_SPARK_API: ON
               #SDKROOT: '/Applications/Xcode_10.3.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.14.sdk'
-              MACOSX_DEPLOYMENT_TARGET: '10.15'
+              MACOSX_DEPLOYMENT_TARGET: '11'
 
         pool:
           vmImage: $(imageName)
@@ -117,7 +117,7 @@ stages:
         strategy:
           matrix:
             ubuntu_18:
-              imageName: 'ubuntu-20.04'
+              imageName: 'ubuntu-22.04'
         pool:
           vmImage: $(imageName)
 

apis/java/build.gradle

@@ -7,7 +7,7 @@ plugins {
 }
 
 group 'io.tiledb'
-version '0.26.0'
+version '0.27.0'
 
 sourceCompatibility = 1.8
 targetCompatibility = 1.8

apis/python/conda-env.yml

@@ -14,5 +14,4 @@ dependencies:
   - pip:
     - pytest-runner==5.1
     - pytest==5.1.2
-    - tiledb
   - zipp<3.16

apis/spark/build.gradle

@@ -7,7 +7,7 @@ plugins {
 }
 
 group 'io.tiledb'
-version '0.26.0'
+version '0.27.0'
 
 sourceCompatibility = 1.8
 targetCompatibility = 1.8

apis/spark3/build.gradle

@@ -7,7 +7,7 @@ plugins {
 }
 
 group 'io.tiledb'
-version '0.26.0'
+version '0.27.0'
 
 sourceCompatibility = 1.8
 targetCompatibility = 1.8

ci/azure-linux_mac.yml

@@ -158,6 +158,8 @@ steps:
         pushd apis/python
         micromamba create -f conda-env.yml -y
         micromamba activate tiledbvcf-py
+        pip debug --verbose
+        pip install -vvv tiledb
 
         # Install and test the Python API
         python setup.py install --user

libtiledbvcf/cmake/Modules/FindTileDB_EP.cmake

@@ -52,20 +52,20 @@ else()
     # Try to download prebuilt artifacts unless the user specifies to build from source
     if(DOWNLOAD_TILEDB_PREBUILT)
         if (WIN32) # Windows
-          SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.17.4/tiledb-windows-x86_64-2.17.4-a1f648e.zip")
-          SET(DOWNLOAD_SHA1 "d82a090d231e5cebd10205af8b80884e934b9e9f")
+          SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.18.2/tiledb-windows-x86_64-2.18.2-9ae6e1a.zip")
+          SET(DOWNLOAD_SHA1 "c440403fde701e5014a7ffa046d38bb49b141e55")
         elseif(APPLE) # OSX
 
           if (CMAKE_OSX_ARCHITECTURES STREQUAL x86_64 OR CMAKE_SYSTEM_PROCESSOR MATCHES "(x86_64)|(AMD64|amd64)|(^i.86$)")
-            SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.17.4/tiledb-macos-x86_64-2.17.4-a1f648e.tar.gz")
-            SET(DOWNLOAD_SHA1 "9e3807e1b63b21849a374c6d9c9f161b46a9cc5a")
+            SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.18.2/tiledb-macos-x86_64-2.18.2-9ae6e1a.tar.gz")
+            SET(DOWNLOAD_SHA1 "6ba986407b2d0e25fb5df19d08ed22fefeac1c2a")
           elseif (CMAKE_OSX_ARCHITECTURES STREQUAL arm64 OR CMAKE_SYSTEM_PROCESSOR MATCHES "^aarch64" OR CMAKE_SYSTEM_PROCESSOR MATCHES "^arm")
-            SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.17.4/tiledb-macos-arm64-2.17.4-a1f648e.tar.gz")
-            SET(DOWNLOAD_SHA1 "e6ec0634f665943ff9879041ab122bdaa96349df")
+            SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.18.2/tiledb-macos-arm64-2.18.2-9ae6e1a.tar.gz")
+            SET(DOWNLOAD_SHA1 "4395a283db57844a944f02dab5bd0f0001eb7e30")
           endif()
         else() # Linux
-          SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.17.4/tiledb-linux-x86_64-2.17.4-a1f648e.tar.gz")
-          SET(DOWNLOAD_SHA1 "7849cbbf19f5f9252e4be5350328754b01938aaa")
+          SET(DOWNLOAD_URL "https://github.com/TileDB-Inc/TileDB/releases/download/2.18.2/tiledb-linux-x86_64-2.18.2-9ae6e1a.tar.gz")
+          SET(DOWNLOAD_SHA1 "6386504a58d52330f41fa688a2b259b67824e2c8")
         endif()
 
         ExternalProject_Add(ep_tiledb
@@ -87,8 +87,8 @@ else()
     else() # Build from source
         ExternalProject_Add(ep_tiledb
           PREFIX "externals"
-          URL "https://github.com/TileDB-Inc/TileDB/archive/2.17.4.zip"
-          URL_HASH SHA1=a6a848cd3d3f19ed1dd6057e3f05fb7b54740016
+          URL "https://github.com/TileDB-Inc/TileDB/archive/2.18.2.zip"
+          URL_HASH SHA1=70bb2e9a7603675849830b763d1a0d17fce4bafa
           DOWNLOAD_NAME "tiledb.zip"
           CMAKE_ARGS
             -DCMAKE_INSTALL_PREFIX=${EP_INSTALL_PREFIX}