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Enrich the genome region view #32

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Merged
huruifeng merged 39 commits into from
Mar 31, 2026
Merged

Enrich the genome region view #32

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f73eed6
Update README.md
huruifeng Oct 3, 2025
1a437a2
Merge pull request #28 from TheDongLab/huruifeng_main
huruifeng Oct 13, 2025
fc31dfc
Merge pull request #29 from TheDongLab/huruifeng_main
huruifeng Oct 21, 2025
9b7cf09
Merge pull request #30 from TheDongLab/huruifeng_main
huruifeng Feb 9, 2026
bef6198
Update options menu
Rehpotsirhc-z Feb 11, 2026
be0149e
Allow multiple strands and add per-track y-axis height
Rehpotsirhc-z Mar 8, 2026
41f9039
Update minus strand color and fix refresh on dataset change
Rehpotsirhc-z Mar 8, 2026
c01fb3f
Allow clicking genes in genomic region view
Rehpotsirhc-z Mar 10, 2026
cbb7c21
Better jitter for genomic region view
Rehpotsirhc-z Mar 11, 2026
fc5677a
Add autocomplete and fix bigwig celltype fetch
Rehpotsirhc-z Mar 11, 2026
76dd95e
Format
Rehpotsirhc-z Mar 11, 2026
0f7014a
Fix parse region string
Rehpotsirhc-z Mar 12, 2026
f2a4e96
Add exon rendering to genomic region view
Rehpotsirhc-z Mar 12, 2026
4bd6a6f
Fix hover labels for exons
Rehpotsirhc-z Mar 13, 2026
7d21d5a
Update colors for biotypes
Rehpotsirhc-z Mar 13, 2026
7f8dd8d
Use Ensembl ID indexing for genomic region view
Rehpotsirhc-z Mar 15, 2026
ec58d09
Fix onClick for signal plus/minus
Rehpotsirhc-z Mar 15, 2026
1f4fd48
Update visuals of genomic region view
Rehpotsirhc-z Mar 15, 2026
446ea03
Fix onClick for single track signals
Rehpotsirhc-z Mar 15, 2026
f70e0a1
Update QTL view for Ensembl ID
Rehpotsirhc-z Mar 16, 2026
595b7fe
Fix caQTL view after new format
Rehpotsirhc-z Mar 17, 2026
a133923
Fix one transcript issue
Rehpotsirhc-z Mar 17, 2026
ae33eb4
Make get SNP position function safer
Rehpotsirhc-z Mar 17, 2026
b7b3f2b
Remove genomic region view title
Rehpotsirhc-z Mar 18, 2026
9979699
Make the url show visible range
Rehpotsirhc-z Mar 18, 2026
f20a1a4
WIP! Clamp range to be greater than 0
Rehpotsirhc-z Mar 18, 2026
ede1763
Fix caQTL parsing, clamp above 0, and use visible region
Rehpotsirhc-z Mar 19, 2026
6d6a348
Add genomic coordinates to xQTL view
Rehpotsirhc-z Mar 19, 2026
b941fd9
Add 10% padding in genomic region view
Rehpotsirhc-z Mar 19, 2026
ea93d8f
Reverse cell type order
Rehpotsirhc-z Mar 19, 2026
b2445f2
Allow multiple GWAS
Rehpotsirhc-z Mar 19, 2026
9c7efc8
Add GWAS label
Rehpotsirhc-z Mar 19, 2026
b469baf
Fix centering
Rehpotsirhc-z Mar 19, 2026
5155653
Add changes to SNP view
Rehpotsirhc-z Mar 20, 2026
24cfd08
Add GENCODE version
Rehpotsirhc-z Mar 20, 2026
fbee387
Update Genomic Region View for multiple GWAS
Rehpotsirhc-z Mar 20, 2026
a62f5de
Update key
Rehpotsirhc-z Mar 21, 2026
c631110
Merge pull request #31 from TheDongLab/christopher-main
huruifeng Mar 28, 2026
ec354b8
Merge branch 'huruifeng_main' into main
huruifeng Mar 31, 2026
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