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  1. ohdsi-fhir-omop-showcase-demo ohdsi-fhir-omop-showcase-demo Public

    FHIR-to-OMOP research repository extending an OHDSI 2026 software demo with FHIRy, pandas, pyOMOP, OMOP CDM, Athena mapping, and a Transformation Fidelity Layer for provenance, traceability, warnin…

    Jupyter Notebook

  2. sam-brats-robustness-audit sam-brats-robustness-audit Public

    Benchmarking SAM for multi-organ medical segmentation under domain shift and perturbation conditions

    Jupyter Notebook

  3. genomic-evidence-reliability genomic-evidence-reliability Public

    Quantifies how reliable genomic variant evidence remains over time using ClinVar data, interpretable metadata signals, weak supervision, and a probabilistic Evidence Stability Model. Built for trus…

    Jupyter Notebook

  4. neurofhir-qc neurofhir-qc Public

    A human-in-the-loop FHIR R4 application for longitudinal brain-tumor and lesion volumetry, AI quality control, provenance, human review, and validated FHIR write-back using public de-identified MRI…

    Jupyter Notebook

  5. neuroimaging-fhir-omop-fidelity neuroimaging-fhir-omop-fidelity Public

    FHIR R4 to OMOP/MI-CDM transformation for longitudinal brain MRI with imaging-specific semantic-preservation contracts, versioned fidelity audits, and cohort-equivalence tests.

    Jupyter Notebook