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Add UKCEH/Turing models #72

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f4e8316
Add UKCEH models
KatrionaGoldmann Jan 27, 2025
5645129
Add UKCEH models
KatrionaGoldmann Jan 27, 2025
3e6d5c0
Merge branch 'RolnickLab:main' into main
KatrionaGoldmann Jan 27, 2025
786e6ce
uncomment models
KatrionaGoldmann Jan 27, 2025
b3b5364
Merge origin
KatrionaGoldmann Jan 27, 2025
e064385
fix catch
KatrionaGoldmann Jan 27, 2025
73f1e7e
wrong labels file
KatrionaGoldmann Jan 28, 2025
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10 changes: 10 additions & 0 deletions trapdata/api/api.py
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Original file line number Diff line number Diff line change
Expand Up @@ -21,6 +21,11 @@
MothClassifierQuebecVermont,
MothClassifierTuringAnguilla,
MothClassifierTuringCostaRica,
MothClassifierTuringJapan,
MothClassifierTuringKenyaUganda,
MothClassifierTuringMadagascar,
MothClassifierTuringSingapore,
MothClassifierTuringThailand,
MothClassifierUKDenmark,
)
from .models.localization import APIMothDetector
Expand All @@ -45,6 +50,11 @@
"uk_denmark_moths_2023": MothClassifierUKDenmark,
"costa_rica_moths_turing_2024": MothClassifierTuringCostaRica,
"anguilla_moths_turing_2024": MothClassifierTuringAnguilla,
"singapore_moths_turing_2024": MothClassifierTuringSingapore,
"thailand_moths_turing_2024": MothClassifierTuringThailand,
"madagascar_moths_turing_2024": MothClassifierTuringMadagascar,
"kenya-uganda_moths_turing_2024": MothClassifierTuringKenyaUganda,
"japan_moths_turing_2024": MothClassifierTuringJapan,
"global_moths_2024": MothClassifierGlobal,
"moth_binary": MothClassifierBinary,
}
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31 changes: 31 additions & 0 deletions trapdata/api/models/classification.py
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Original file line number Diff line number Diff line change
Expand Up @@ -14,6 +14,11 @@
QuebecVermontMothSpeciesClassifier2024,
TuringAnguillaSpeciesClassifier,
TuringCostaRicaSpeciesClassifier,
TuringJapanSpeciesClassifier,
TuringKenyaUgandaSpeciesClassifier,
TuringMadagascarSpeciesClassifier,
TuringSingaporeSpeciesClassifier,
TuringThailandSpeciesClassifier,
UKDenmarkMothSpeciesClassifier2024,
)

Expand Down Expand Up @@ -186,5 +191,31 @@ class MothClassifierTuringAnguilla(APIMothClassifier, TuringAnguillaSpeciesClass
pass


class MothClassifierTuringJapan(APIMothClassifier, TuringJapanSpeciesClassifier):
pass


class MothClassifierTuringKenyaUganda(
APIMothClassifier, TuringKenyaUgandaSpeciesClassifier
):
pass


class MothClassifierTuringMadagascar(
APIMothClassifier, TuringMadagascarSpeciesClassifier
):
pass


class MothClassifierTuringThailand(APIMothClassifier, TuringThailandSpeciesClassifier):
pass


class MothClassifierTuringSingapore(
APIMothClassifier, TuringSingaporeSpeciesClassifier
):
pass


class MothClassifierGlobal(APIMothClassifier, GlobalMothSpeciesClassifier):
pass
35 changes: 35 additions & 0 deletions trapdata/ml/models/classification.py
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Original file line number Diff line number Diff line change
Expand Up @@ -353,6 +353,41 @@ class TuringAnguillaSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turi
labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification/01_anguilla_data_category_map.json"


class TuringThailandSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing Thailand Species Classifier"
description = "Trained on 11th November 2024 by Turing team using Resnet50 model."
weights_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//turing-thailand_v01_resnet50_2024-11-21-16-28_state.pt"
labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//01_thailand_data_category_map.json"


class TuringMadagascarSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing Madagascar Species Classifier"
description = "Trained on 11th November 2024 by Turing team using Resnet50 model."
weights_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//turing-madagascar_v01_resnet50_2024-07-01-13-01_state.pt"
labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//01_madagascar_data_category_map.json"


class TuringKenyaUgandaSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing Kenya and Uganda Species Classifier"
description = "Trained on 19th November 2024 by Turing team using Resnet50 model."
weights_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//turing-kenya-uganda_v01_resnet50_2024-11-19-18-44_state.pt"
labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//01_kenya-uganda_data_category_map.json"


class TuringJapanSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing Japan Species Classifier"
description = "Trained on 19th November 2024 by Turing team using Resnet50 model."
weights_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//turing-japan_v01_resnet50_2024-11-22-17-22_state.pt"
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@mihow mihow Jan 19, 2026

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These weight files don't actually exist in this location (yet).

labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//01_japan_data_category_map.json"


class TuringSingaporeSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing Singapore Species Classifier"
description = "Trained on 21st November 2024 by Turing team using Resnet50 model."
weights_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//turing-singapore_v02_resnet50_2024-11-21-19-58_state.pt"
labels_path = "https://object-arbutus.cloud.computecanada.ca/ami-models/moths/classification//02_singapore_data_category_map.json"


class TuringUKSpeciesClassifier(SpeciesClassifier, Resnet50Classifier_Turing):
name = "Turing UK Species Classifier"
description = "Trained on 13th May 2024 by Turing team using Resnet50 model."
Expand Down
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