autoupgrade CRAN modules

Scripts/CRAN/list.summary-override

@@ -14,6 +14,7 @@ xlsx	Handle Excel 97/2000/XP/2003/2007 files
 odbc	DBI-compatible interface to ODBC databases
 blob	Binary object data S3 class
 xml2	Interface to libxml2 for XML file parsing
+rrcov	Scalable Estimators with High Breakdown Point
 bslib	Custom Bootstrap and Sass themes
 broom	Convert statistical analysis into Tidy tibbles
 servr	Simple HTTP server - static and dynamic files
@@ -25,6 +26,7 @@ rjson	JSON <=> R object converter
 rlang	Base type functions and core features for R
 later	Event loop scheduling utilities
 knitr	General-purpose dynamic report generation
+pyinit	P-Y Initial Estimator for Robust S-Regression
 reprex	Prepare Reproducible Example Code via Clipboard
 locfit	Local regression, likihood, density estimation
 inline	Inline function calls to C, C++, and Fortran

bucket_16/R-igraph/distinfo

@@ -1 +1 @@
-52d2a79bb76bece97eb9a342069dc13ce458ddd767387b9476b063f29fe0529f      4987159 CRAN/igraph_2.1.2.tar.gz
+6068fb7357c8f11f7a45379b7e463b3b69a2abc5a51df65ba1746421a14daeff      4997489 CRAN/igraph_2.1.3.tar.gz

bucket_16/R-igraph/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	2.1.2
+DEF[PORTVERSION]=	2.1.3
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-igraph
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		igraph_2.1.2.tar.gz:main
+DISTFILE[1]=		igraph_2.1.3.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_1E/R-pyinit/descriptions/desc.single

@@ -0,0 +1,6 @@
+pyinit: Pena-Yohai Initial Estimator for Robust S-Regression
+
+Deterministic Pena-Yohai initial estimator for robust S estimators of
+regression. The procedure is described in detail in Pena, D., & Yohai,
+V. (1999) &lt;<a href="https://doi.org/10.2307%2F2670164"
+target="_top">doi:10.2307/2670164</a>&gt;.

bucket_1E/R-pyinit/distinfo

@@ -0,0 +1 @@
+d6e7826d62e8ed65b7afa56959a395d2ed2294b13b533297f627b444ca8d7c31        21452 CRAN/pyinit_1.1.3.tar.gz

bucket_1E/R-pyinit/specification

@@ -0,0 +1,34 @@
+DEF[PORTVERSION]=	1.1.3
+# ------------------------------------------------------------------------
+
+NAMEBASE=		R-pyinit
+VERSION=		${PORTVERSION}
+KEYWORDS=		cran
+VARIANTS=		std
+SDESC[std]=		P-Y Initial Estimator for Robust S-Regression
+HOMEPAGE=		https://github.com/dakep/pyinit
+CONTACT=		CRAN_Automaton[[email protected]]
+
+DOWNLOAD_GROUPS=	main
+SITES[main]=		CRAN/src/contrib
+			https://loki.dragonflybsd.org/cranfiles/
+DISTFILE[1]=		pyinit_1.1.3.tar.gz:main
+DIST_SUBDIR=		CRAN
+DF_INDEX=		1
+
+SPKGS[std]=		single
+
+OPTIONS_AVAILABLE=	none
+OPTIONS_STANDARD=	none
+
+# License listed on https://cran.r-project.org/
+# => GPL-2 | GPL-3 [expanded from: GPL (>= 2)]
+
+USES=			cran gmake
+DISTNAME=		pyinit
+GENERATED=		yes
+INSTALL_REQ_TOOLCHAIN=	yes
+
+BUILDRUN_DEPENDS=	R-robustbase:single:std
+
+

bucket_42/R-RobStatTM/descriptions/desc.single

@@ -0,0 +1,8 @@
+RobStatTM: Robust Statistics: Theory and Methods
+
+Companion package for the book: "Robust Statistics: Theory and Methods,
+second edition", &lt;<a href="http://www.wiley.com/go/maronna/robust"
+target="_top">http://www.wiley.com/go/maronna/robust</a>&gt;. This package
+contains code that implements the robust estimators discussed in the recent
+second edition of the book above, as well as the scripts reproducing all
+the examples in the book.

bucket_42/R-RobStatTM/distinfo

@@ -0,0 +1 @@
+da89c98a76fb2d8c4cd5c54a98eccf57e7ddaf67ae355e235ae93f2e1610901a       828413 CRAN/RobStatTM_1.0.11.tar.gz

bucket_42/R-RobStatTM/specification

@@ -0,0 +1,36 @@
+DEF[PORTVERSION]=	1.0.11
+# ------------------------------------------------------------------------
+
+NAMEBASE=		R-RobStatTM
+VERSION=		${PORTVERSION}
+KEYWORDS=		cran
+VARIANTS=		std
+SDESC[std]=		Robust Statistics: Theory and Methods
+HOMEPAGE=		none
+CONTACT=		CRAN_Automaton[[email protected]]
+
+DOWNLOAD_GROUPS=	main
+SITES[main]=		CRAN/src/contrib
+			https://loki.dragonflybsd.org/cranfiles/
+DISTFILE[1]=		RobStatTM_1.0.11.tar.gz:main
+DIST_SUBDIR=		CRAN
+DF_INDEX=		1
+
+SPKGS[std]=		single
+
+OPTIONS_AVAILABLE=	none
+OPTIONS_STANDARD=	none
+
+# License listed on https://cran.r-project.org/
+# => GPL (>= 3)
+
+USES=			cran gmake
+DISTNAME=		RobStatTM
+GENERATED=		yes
+INSTALL_REQ_TOOLCHAIN=	yes
+
+BUILDRUN_DEPENDS=	R-pyinit:single:std
+			R-rrcov:single:std
+			R-robustbase:single:std
+
+

bucket_51/R-xfun/distinfo

@@ -1 +1 @@
-cd2102895cca4ba8b81601eab0b724ad4c7ad15485720e427fc021b950b1b375       166426 CRAN/xfun_0.49.tar.gz
+4d0c9a983ac67e7f82592273567313ba836dcd832386f30b4409ecd5b3f2410a       173997 CRAN/xfun_0.50.tar.gz

bucket_51/R-xfun/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	0.49
+DEF[PORTVERSION]=	0.50
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-xfun
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		xfun_0.49.tar.gz:main
+DISTFILE[1]=		xfun_0.50.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_55/R-rrcov/descriptions/desc.single

@@ -0,0 +1,18 @@
+rrcov: Scalable Robust Estimators with High Breakdown Point
+
+Robust Location and Scatter Estimation and Robust Multivariate Analysis
+with High Breakdown Point: principal component analysis (Filzmoser and
+Todorov (2013), &lt;<a href="https://doi.org/10.1016%2Fj.ins.2012.10.017"
+target="_top">doi:10.1016/j.ins.2012.10.017</a>&gt;), linear and quadratic
+discriminant analysis (Todorov and Pires (2007)), multivariate tests
+(Todorov and Filzmoser (2010) &lt;<a
+href="https://doi.org/10.1016%2Fj.csda.2009.08.015"
+target="_top">doi:10.1016/j.csda.2009.08.015</a>&gt;), outlier detection
+(Todorov et al. (2010) &lt;<a
+href="https://doi.org/10.1007%2Fs11634-010-0075-2"
+target="_top">doi:10.1007/s11634-010-0075-2</a>&gt;). See also Todorov and
+Filzmoser (2009) &lt;urn:isbn:978-3838108148&gt;, Todorov and Filzmoser
+(2010) &lt;<a href="https://doi.org/10.18637%2Fjss.v032.i03"
+target="_top">doi:10.18637/jss.v032.i03</a>&gt; and Boudt et al. (2019)
+&lt;<a href="https://doi.org/10.1007%2Fs11222-019-09869-x"
+target="_top">doi:10.1007/s11222-019-09869-x</a>&gt;.

bucket_55/R-rrcov/distinfo

@@ -0,0 +1 @@
+b8a2c07c42e4e76e9f90cb016cb72a40f6d2ce1f10d1753c06e3344f38e148de      1541901 CRAN/rrcov_1.7-6.tar.gz

bucket_55/R-rrcov/specification

@@ -0,0 +1,36 @@
+DEF[PORTVERSION]=	1.7-6
+# ------------------------------------------------------------------------
+
+NAMEBASE=		R-rrcov
+VERSION=		${PORTVERSION}
+KEYWORDS=		cran
+VARIANTS=		std
+SDESC[std]=		Scalable Estimators with High Breakdown Point
+HOMEPAGE=		https://github.com/valentint/rrcov
+CONTACT=		CRAN_Automaton[[email protected]]
+
+DOWNLOAD_GROUPS=	main
+SITES[main]=		CRAN/src/contrib
+			https://loki.dragonflybsd.org/cranfiles/
+DISTFILE[1]=		rrcov_1.7-6.tar.gz:main
+DIST_SUBDIR=		CRAN
+DF_INDEX=		1
+
+SPKGS[std]=		single
+
+OPTIONS_AVAILABLE=	none
+OPTIONS_STANDARD=	none
+
+# License listed on https://cran.r-project.org/
+# => GPL (>= 3)
+
+USES=			cran gmake
+DISTNAME=		rrcov
+GENERATED=		yes
+INSTALL_REQ_TOOLCHAIN=	yes
+
+BUILDRUN_DEPENDS=	R-robustbase:single:std
+			R-mvtnorm:single:std
+			R-pcaPP:single:std
+
+

bucket_60/R-classInt/distinfo

@@ -1 +1 @@
-c3561eafbc493ac02840191d4f1e4d2ef437ca8eb20f41fc5eca28f00ee42b8b       440271 CRAN/classInt_0.4-10.tar.gz
+8d366844cf7f951cc5b65423c3ccf50ebc3c11cf9d1fc90f8208e7d869c5d0a6       440406 CRAN/classInt_0.4-11.tar.gz

bucket_60/R-classInt/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	0.4-10
+DEF[PORTVERSION]=	0.4-11
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-classInt
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		classInt_0.4-10.tar.gz:main
+DISTFILE[1]=		classInt_0.4-11.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_91/R-pcaPP/descriptions/desc.single

@@ -0,0 +1,11 @@
+pcaPP: Robust PCA by Projection Pursuit
+
+Provides functions for robust PCA by projection pursuit. The methods are
+described in Croux et al. (2006) &lt;<a
+href="https://doi.org/10.2139%2Fssrn.968376"
+target="_top">doi:10.2139/ssrn.968376</a>&gt;, Croux et al. (2013) &lt;<a
+href="https://doi.org/10.1080%2F00401706.2012.727746"
+target="_top">doi:10.1080/00401706.2012.727746</a>&gt;, Todorov and
+Filzmoser (2013) &lt;<a
+href="https://doi.org/10.1007%2F978-3-642-33042-1_31"
+target="_top">doi:10.1007/978-3-642-33042-1_31</a>&gt;.

bucket_91/R-pcaPP/distinfo

@@ -0,0 +1 @@
+674faed967016a19f9d927506d6b3f4fc7ff2b2ab5679b2368429ee2c61b7c10       200521 CRAN/pcaPP_2.0-5.tar.gz

bucket_91/R-pcaPP/specification

@@ -0,0 +1,34 @@
+DEF[PORTVERSION]=	2.0-5
+# ------------------------------------------------------------------------
+
+NAMEBASE=		R-pcaPP
+VERSION=		${PORTVERSION}
+KEYWORDS=		cran
+VARIANTS=		std
+SDESC[std]=		Robust PCA by Projection Pursuit
+HOMEPAGE=		https://github.com/valentint/pcaPP
+CONTACT=		CRAN_Automaton[[email protected]]
+
+DOWNLOAD_GROUPS=	main
+SITES[main]=		CRAN/src/contrib
+			https://loki.dragonflybsd.org/cranfiles/
+DISTFILE[1]=		pcaPP_2.0-5.tar.gz:main
+DIST_SUBDIR=		CRAN
+DF_INDEX=		1
+
+SPKGS[std]=		single
+
+OPTIONS_AVAILABLE=	none
+OPTIONS_STANDARD=	none
+
+# License listed on https://cran.r-project.org/
+# => GPL (>= 3)
+
+USES=			cran gmake
+DISTNAME=		pcaPP
+GENERATED=		yes
+INSTALL_REQ_TOOLCHAIN=	yes
+
+BUILDRUN_DEPENDS=	R-mvtnorm:single:std
+
+

bucket_96/R-pillar/distinfo

@@ -1 +1 @@
-97f6bb5d54388e9fbc2d6e5d3c883374105fadbc9c9aad38e7b4e1389970eadb       179892 CRAN/pillar_1.10.0.tar.gz
+aedf2be881d0720256b58e0cf3bdd501c7cc5504c394399ea22ea1ac18af449d       407070 CRAN/pillar_1.10.1.tar.gz

bucket_96/R-pillar/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	1.10.0
+DEF[PORTVERSION]=	1.10.1
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-pillar
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		pillar_1.10.0.tar.gz:main
+DISTFILE[1]=		pillar_1.10.1.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_98/R-curl/distinfo

@@ -1 +1 @@
-841c90bed7745f972ab524e542b1f5c3632767e3d521c163d483e436f3d42362       932716 CRAN/curl_6.0.1.tar.gz
+81d45525057fe21be3d57071e65032114c9014392454dd40ff32ca5e5ae2c539       932957 CRAN/curl_6.1.0.tar.gz

bucket_98/R-curl/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	6.0.1
+DEF[PORTVERSION]=	6.1.0
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-curl
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		curl_6.0.1.tar.gz:main
+DISTFILE[1]=		curl_6.1.0.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_9D/R-spData/descriptions/desc.single

@@ -4,7 +4,8 @@ Diverse spatial datasets for demonstrating, benchmarking and teaching
 spatial data analysis. It includes R data of class sf (defined by the
 package 'sf'), Spatial ('sp'), and nb ('spdep'). Unlike other spatial data
 packages such as 'rnaturalearth' and 'maps', it also contains data stored
-in a range of file formats including GeoJSON, ESRI Shapefile and
-GeoPackage. Some of the datasets are designed to illustrate specific
-analysis techniques. cycle_hire() and cycle_hire_osm(), for example, is
-designed to illustrate point pattern analysis techniques.
+in a range of file formats including GeoJSON and GeoPackage, but from
+version 2.3.4, no longer ESRI Shapefile - use GeoPackage instead. Some of
+the datasets are designed to illustrate specific analysis techniques.
+cycle_hire() and cycle_hire_osm(), for example, is designed to illustrate
+point pattern analysis techniques.

bucket_9D/R-spData/distinfo

@@ -1 +1 @@
-c093b9ebc631954d504af96268041e171ba8e156f9d06307a0905838009e39e0      4406482 CRAN/spData_2.3.3.tar.gz
+7094318e47e1f00c98712def5c8f42d8f0cdf48a97a0ec421aec8880ca78fa33      3806775 CRAN/spData_2.3.4.tar.gz

bucket_9D/R-spData/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	2.3.3
+DEF[PORTVERSION]=	2.3.4
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-spData
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		spData_2.3.3.tar.gz:main
+DISTFILE[1]=		spData_2.3.4.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_A0/R-rgl/distinfo

@@ -1 +1 @@
-9a44f7e0ba5c201a7df3168d2b493eb3344f84faaac807c704f52e6196d9c395      4067443 CRAN/rgl_1.3.14.tar.gz
+01cf29ea1a0efba833e44a30ca4e6a8d2226edd76ba06d81aef2dea48e6e9fae      4084650 CRAN/rgl_1.3.16.tar.gz

bucket_A0/R-rgl/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	1.3.14
+DEF[PORTVERSION]=	1.3.16
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-rgl
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		rgl_1.3.14.tar.gz:main
+DISTFILE[1]=		rgl_1.3.16.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 

bucket_EC/R-tidyquant/distinfo

@@ -1 +1 @@
-a7f7226acc688940e290972ff2b6ae4674c410c90c5968d5890514c7b1fe4ab1      4605061 CRAN/tidyquant_1.0.9.tar.gz
+47a84dd7d89b90fab3ca8f5600882ad1cc71f1c9df0ddbf8e0cbc24395f17d0c      1151269 CRAN/tidyquant_1.0.10.tar.gz

bucket_EC/R-tidyquant/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	1.0.9
+DEF[PORTVERSION]=	1.0.10
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-tidyquant
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		tidyquant_1.0.9.tar.gz:main
+DISTFILE[1]=		tidyquant_1.0.10.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1
 
@@ -38,6 +38,7 @@ BUILDRUN_DEPENDS=	R-dplyr:single:std
 			R-lubridate:single:std
 			R-magrittr:single:std
 			R-PerformanceAnalytics:single:std
+			R-RobStatTM:single:std
 			R-quantmod:single:std
 			R-purrr:single:std
 			R-readr:single:std

bucket_F0/R-matrixStats/distinfo

@@ -1 +1 @@
-ac6d65cab6ca30926f35bc3bc59b869946ae92e4738ceca90fad6620fc6ecd10       213623 CRAN/matrixStats_1.4.1.tar.gz
+12996c5f3e6fc202a43e1087f16a71b7fa93d7e908f512542c7ee89cf95dcc15       212156 CRAN/matrixStats_1.5.0.tar.gz

bucket_F0/R-matrixStats/specification

@@ -1,4 +1,4 @@
-DEF[PORTVERSION]=	1.4.1
+DEF[PORTVERSION]=	1.5.0
 # ------------------------------------------------------------------------
 
 NAMEBASE=		R-matrixStats
@@ -12,7 +12,7 @@ CONTACT=		CRAN_Automaton[[email protected]]
 DOWNLOAD_GROUPS=	main
 SITES[main]=		CRAN/src/contrib
 			https://loki.dragonflybsd.org/cranfiles/
-DISTFILE[1]=		matrixStats_1.4.1.tar.gz:main
+DISTFILE[1]=		matrixStats_1.5.0.tar.gz:main
 DIST_SUBDIR=		CRAN
 DF_INDEX=		1