FAQ
See the categories below. Search them for the question you might have. If your question is not answered on this page, you can reach out to us as described in the landing page.
Open the terminal and type docker ps.
There you'll find the pseudonym for your docker instance.
An example would be "eager_student".
Now type docker exec -it -u root eager_student bash.
You are now in a terminal inside your docker instance.
To exit, type exit.
Make sure that you have supplied image files in the correct format (as seen in the middle of the UI).
Also make sure, that your parameters are in line as described in this wiki page: https://github.com/RUB-Bioinf/VesselExpress/wiki/Parameters-for-VesselExpress
You can read extract the log files from the docker for analysis. First, enter the docker with your terminal (see above). Then, you can locate the logs in this directory:
/path/to/logs
Lastly, you can always submit a bug report here:
Leave the terminal running while using VesselExpress. The terminal hosts VesselExpress and when you close it, the connection to the webseite is lost and your calculations interrupted.
No, VesselExpress is running on the machine you execute the docker in. You use the Webseite to communicate with your docker. That means, calculations made, are running on your own device and VesselExpress' performance is dependent on the hardware you supply.
Currently, VesselExpress does not support Microsoft Internet Explorer. Alternatively, you can try using other Browsers, i.e. Mozilla Firefox, Google Chrome or Microsoft Edge.
