Simple tools for handling rooted phylogenetic or genealogic trees with Julia. I used this package for all of my work related to trees and found it useful. I hope you will to! A very brief list of what it can do:
- read and write Newick files
- generate random trees in different ways: birth-death / coalescent / basic shapes
- attach arbitrary data to tree nodes
- compute distance between nodes in a tree, their most recent common ancestor, etc...
- traverse the tree (post-order or arbitrary)
- prune nodes, insert nodes, remove singletons
- re-root the tree (docs not written yet)
- decompose the tree into splits and perform operations on them (docs not written yet)
Please read the documentation to discover what you can do with the package.