Papatheodorou Group
- 7 followers
- United Kingdom
- https://www.ebi.ac.uk/research/papatheodorou/
Popular repositories Loading
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CATD_snakemake
CATD_snakemake PublicSnakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq datasets
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scOntoMatch
scOntoMatch PublicscOntoMatch is an R package which unifies ontology annotation of scRNA-seq datasets to make them comparable across studies
HTML 11
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BENGAL_reproducibility
BENGAL_reproducibility PublicBENchmark inteGrAtion strategies for cross-species anaLysis of single cell RNA sequencing data
Jupyter Notebook 5
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GeneSpectra
GeneSpectra PublicGENE classification and cross-SPECies comparison of cell Types with single cell RNA-seq data
Python
Repositories
- DANIO_ReCODE_scRNAseq_workshop_2026 Public
Single cell transcriptomics training for the DANIO-ReCODe Doctoral Network, 2026
- EISCA_training_course Public
This repository contains the data and tutorials for single-cell analysis using EISCA.
- HELMSLEY_Crohn_scRNA-Seq Public Forked from fnadalin/HELMSLEY_Crohn_scRNA-Seq
scRNA-Seq analysis of fibrostenosing Crohn's disease
- GeneSpectra Public
GENE classification and cross-SPECies comparison of cell Types with single cell RNA-seq data
- GeneSpectra_reproducibility Public
Scripts and notebooks which generated results in the GeneSpecira preprint
- BENGAL Public
Nextflow pipeline for cross-species integration and assessment of single cell RNA-seq datasets
- CATD_snakemake Public
Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq datasets
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