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Output switches for output volumes of iHAMOCC #478

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Merged
jmaerz merged 10 commits into from
Apr 4, 2025
Merged

Output switches for output volumes of iHAMOCC #478

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e9c4911
start providing infracstructure to switch between iHAMOCC ouput options
jmaerz Feb 5, 2025
b4d837c
revert to medium to comply to previous default settings
jmaerz Feb 5, 2025
ce8ceed
change name and fix output type
jmaerz Feb 5, 2025
ec29a5f
Either choose is_test OR hamocc_output_size values
jmaerz Feb 7, 2025
6893e78
removing show-casing entries
jmaerz Mar 28, 2025
b23a391
Merge branch 'master' into output_switches
jmaerz Mar 28, 2025
34eb1ff
introduce reduced output volume for spinup case
jmaerz Mar 28, 2025
ae43fea
make the output volume accessible via xmlchange
jmaerz Mar 28, 2025
5a41ef9
provide usermods for reduced output
jmaerz Mar 31, 2025
f71dfb1
fix namelist definition file
jmaerz Apr 4, 2025
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2 changes: 2 additions & 0 deletions cime_config/buildnml
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Original file line number Diff line number Diff line change
Expand Up @@ -79,6 +79,7 @@ def buildnml(case, caseroot, compname):
blom_coupling = case.get_value("BLOM_COUPLING")
blom_tracer_modules = case.get_value("BLOM_TRACER_MODULES")
blom_atrc = case.get_value("BLOM_ATRC")
hamocc_output = case.get_value("HAMOCC_OUTPUT")
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@JorgSchwinger JorgSchwinger Feb 5, 2025

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I would suggest a more self-explaining name, e.g. HAMOCC_OUTPUT_VOL(UME) or HAMOCC_OUTPUT_SIZE

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@jmaerz jmaerz Feb 5, 2025

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Renamed to HAMOCC_OUTPUT_SIZE

hamocc_ciso = case.get_value("HAMOCC_CISO")
hamocc_extncycle = case.get_value("HAMOCC_EXTNCYCLE")
hamocc_n2oc = case.get_value("HAMOCC_N2OC")
Expand Down Expand Up @@ -189,6 +190,7 @@ def buildnml(case, caseroot, compname):
config["blom_coupling"] = blom_coupling
config["blom_tracer_modules"] = blom_tracer_modules
config["blom_atrc"] = blom_atrc
config["hamocc_output"] = hamocc_output
config["hamocc_ciso"] = "yes" if hamocc_ciso else "no"
config["hamocc_extncycle"] = "yes" if hamocc_extncycle else "no"
config["hamocc_n2oc"] = "yes" if hamocc_n2oc else "no"
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9 changes: 9 additions & 0 deletions cime_config/config_component.xml
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Expand Up @@ -210,6 +210,15 @@
<desc>Namelist option to set sinking scheme. Requires module ecosys</desc>
</entry>

<entry id="HAMOCC_OUTPUT">
<type>char</type>
<valid_values>small,medium,large</valid_values>
<default_value>medium</default_value>
<group>run_component_blom</group>
<file>env_run.xml</file>
<desc>Namelist option to set iHAMOCC output option. Requires module ecosys</desc>
</entry>

<entry id="HAMOCC_PREF_TRACERS">
<type>logical</type>
<valid_values>TRUE,FALSE</valid_values>
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4 changes: 3 additions & 1 deletion cime_config/namelist_definition_blom.xml
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Expand Up @@ -5365,7 +5365,9 @@
<category>diabgc</category>
<group>diabgc</group>
<values>
<value>0,2,2</value>
<value hamocc_output='small'>0,0,2</value>
<value hamocc_output='medium'>0,2,2</value>
<value hamocc_output='large'>2,2,2</value>
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@JorgSchwinger JorgSchwinger Feb 5, 2025

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For daily output it needs to be 4. Or more precisely, whenever more than one time-slice is written into one file, one cannot use 2. The compressed format with offset and scale-factor does not work properly in this case.

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@jmaerz jmaerz Feb 5, 2025

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Can you re-check? The newly pushed commit should have the right output, right?

<value is_test="yes">4,2,2</value>
<value is_test="yes" empty_hist="yes">0,0,0</value>
</values>
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