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61bbc85
First draft of documentation update, more changes are still needed
christopherwharrop-noaa Mar 1, 2026
aeb350a
Update docs main page
christopherwharrop-noaa Mar 3, 2026
a0eb46f
Incremental update to docs, more to come
christopherwharrop-noaa Mar 3, 2026
acf9614
Simplify depencencies for building docs and update docs
christopherwharrop-noaa Mar 5, 2026
193fb97
Fix readthedocs configuration bug
christopherwharrop-noaa Mar 5, 2026
c5bc9d3
Fix readthedocs configuration bug
christopherwharrop-noaa Mar 5, 2026
09abc81
Fix docs typos
christopherwharrop-noaa Mar 5, 2026
2a24c91
Add Conda recipe and update licensing
christopherwharrop-noaa Mar 5, 2026
858d8fa
Update format for License
christopherwharrop-noaa Mar 5, 2026
baf6ef4
Isolate linting tests and rename main test suite workflow file
christopherwharrop-noaa Mar 5, 2026
bc0ecb0
Rename doc build CI job for clarity on GitHub
christopherwharrop-noaa Mar 5, 2026
c23ed36
Fix docs typos and update initial conda recipe
christopherwharrop-noaa Mar 5, 2026
3c38652
Cosmetic fixes to docs and CI
christopherwharrop-noaa Mar 5, 2026
5dfe19c
Fixes for configuration docs
christopherwharrop-noaa Mar 6, 2026
1fcbe39
Fixes for configuration docs
christopherwharrop-noaa Mar 6, 2026
6358c41
Fixes to the quickstart docs
christopherwharrop-noaa Mar 6, 2026
f8601b7
Add comprehensive task decorator docs
christopherwharrop-noaa Mar 6, 2026
751625f
Fix formatting
christopherwharrop-noaa Mar 6, 2026
c67ef78
Add decorator details to docs and fix documented dependencies
christopherwharrop-noaa Mar 6, 2026
b565871
Fix syntax issues in docs
christopherwharrop-noaa Mar 6, 2026
4e47646
Fix docs errors and add data transfer/delete documentation
christopherwharrop-noaa Mar 6, 2026
202e852
Update data transfer/delete docs
christopherwharrop-noaa Mar 6, 2026
70291ed
Fix documentation errors
christopherwharrop-noaa Mar 6, 2026
d3651e7
Update data.py docs and improve data tests
christopherwharrop-noaa Mar 6, 2026
abed0d1
Fix documentation mistakes
christopherwharrop-noaa Mar 7, 2026
2f9f06f
Fix data transfer/delete dependency test
christopherwharrop-noaa Mar 7, 2026
15d547c
Remove expensive ordering test from test_data, use test_tasks instead
christopherwharrop-noaa Mar 7, 2026
6bc3fd8
Fix input dependency task test
christopherwharrop-noaa Mar 7, 2026
2345399
Touch up tasks dependency documentation
christopherwharrop-noaa Mar 7, 2026
32d3558
Fix typos in docs
christopherwharrop-noaa Mar 7, 2026
c283dec
Fix example in task docs
christopherwharrop-noaa Mar 7, 2026
6cb3924
Update README to reflect transition to readthedocs
christopherwharrop-noaa Mar 7, 2026
950c8b2
Correct docs errors
christopherwharrop-noaa Mar 7, 2026
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7 changes: 4 additions & 3 deletions .github/workflows/docs.yaml
Original file line number Diff line number Diff line change
@@ -1,3 +1,5 @@
# SPDX-License-Identifier: Apache-2.0

name: Documentation

on:
Expand All @@ -8,7 +10,7 @@ on:
workflow_dispatch:

jobs:
build:
build-docs:
runs-on: ubuntu-latest
steps:
-
Expand All @@ -22,8 +24,7 @@ jobs:
-
name: Install package and documentation dependencies
run: |
pip install .
pip install -r docs/requirements.txt
pip install ".[docs]"
-
name: Build documentation
run: |
Expand Down
33 changes: 33 additions & 0 deletions .github/workflows/lint.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,33 @@
# SPDX-License-Identifier: Apache-2.0

name: Lint

on:
push:
branches: [ develop, main ]
pull_request:
branches: [ develop, main ]
workflow_dispatch:

jobs:
lint-check:
runs-on: ubuntu-latest
steps:
-
name: Checkout repository
uses: actions/checkout@v4
-
name: Set up Python
uses: actions/setup-python@v5
with:
python-version: '3.13'
cache: 'pip'
-
name: Install ruff
run: pip install ruff==0.15.4
-
name: Run ruff check
run: ruff check
-
name: Run ruff format check
run: ruff format --check --diff .
Original file line number Diff line number Diff line change
@@ -1,4 +1,6 @@
name: ChiltepinTests
# SPDX-License-Identifier: Apache-2.0

name: TestSuite

env:
LATEST_PYTHON_VERSION: '3.13'
Expand All @@ -11,19 +13,6 @@ on:
workflow_dispatch:

jobs:
lint-check:
runs-on: ubuntu-latest
steps:
-
name: Checkout repository
uses: actions/checkout@v4
-
name: Format Check
run: |
pip install ruff
ruff check
ruff format --check --diff .

test-chiltepin-amd64:
runs-on: ubuntu2204-16c-64g-600ssd
timeout-minutes: 360
Expand Down
4 changes: 3 additions & 1 deletion .readthedocs.yaml
Original file line number Diff line number Diff line change
@@ -1,3 +1,4 @@
# SPDX-License-Identifier: Apache-2.0
# Read the Docs configuration file for Sphinx projects
# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details

Expand Down Expand Up @@ -32,6 +33,7 @@ sphinx:
# See https://docs.readthedocs.io/en/stable/guides/reproducible-builds.html
python:
install:
- requirements: docs/requirements.txt
- method: pip
path: .
extra_requirements:
- docs
210 changes: 203 additions & 7 deletions LICENSE
Original file line number Diff line number Diff line change
@@ -1,7 +1,203 @@
Software code created by U.S. Government employees is not subject to copyright
in the United States (17 U.S.C. §105). The United States/Department of Commerce
reserve all rights to seek and obtain copyright protection in countries other
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the Software outside of the United States.

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37 changes: 11 additions & 26 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,21 +1,6 @@
[![ExascaleSandboxTests](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/docker-slurm.yaml/badge.svg)](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/docker-slurm.yaml)
[![ExascaleSandboxTests](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/test-suite.yaml/badge.svg)](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/test-suite.yaml)
[![Documentation](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/docs.yaml/badge.svg)](https://github.com/NOAA-GSL/ExascaleWorkflowSandbox/actions/workflows/docs.yaml)

```
This repository is a scientific product and is not official communication
of the National Oceanic and Atmospheric Administration, or the United States
Department of Commerce. All NOAA GitHub project code is provided on an ‘as
is’ basis and the user assumes responsibility for its use. Any claims against
the Department of Commerce or Department of Commerce bureaus stemming from
the use of this GitHub project will be governed by all applicable Federal
law. Any reference to specific commercial products, processes, or service
by service mark, trademark, manufacturer, or otherwise, does not constitute
or imply their endorsement, recommendation or favoring by the Department of
Commerce. The Department of Commerce seal and logo, or the seal and logo of
a DOC bureau, shall not be used in any manner to imply endorsement of any
commercial product or activity by DOC or the United States Government.
```

# Overview

This repository is a collection of tools and demonstrations used to explore
Expand All @@ -25,16 +10,16 @@ research purposes only.

# Installation

This software can be installed on Linux systems. MacOS is not currently
supported. It can be used, however, on Macs in a container. See below for
instructions for building and using the Docker container.
This software can be installed on Linux systems. Native Windows and macOS are not currently
supported, but Chiltepin can be used on these platforms via the Docker container (see below for
instructions on building and using the Docker container).

The recommended method for installation is to use a Python venv.

```
python -m venv .chiltepin
source .chiltepin/bin/activate
pip install -e .[test]
pip install -e ".[test]"
```

Alternatively, a conda environment (anaconda3, miniconda3, miniforge, etc.)
Expand All @@ -43,7 +28,7 @@ can be used.
```
conda create -n "chiltepin" python=3.10
source activate chiltepin
pip install -e .[test]
pip install -e ".[test]"
```

NOTE: The `[test]` ensures that dependencies required for running the tests are installed.
Expand All @@ -54,14 +39,14 @@ the command appropriate for your environment type (venv, conda, etc).
# Running the test suite

The test suite is run with `pytest` and requires an editable installation of the Chiltepin
repository (achieved using the `pip install -e .` installation step from above)
repository (achieved using the `pip install -e ".[test]"` installation step from above)

An additional step is required for successful completion of the Globus Compute tests. These
tests require users to authenticate to globus before running the pytest command. This is done
with the `globus-compute-endpoint login` command.
tests require users to authenticate to Globus before running the pytest command. This is done
with the `chiltepin login` command.

```
globus-compute-endpoint login
chiltepin login
pytest --assert=plain --config=tests/configs/<platform>.yaml
```

Expand Down Expand Up @@ -109,5 +94,5 @@ pytest --assert=plain --config=tests/configs/docker.yaml
NOTE: the `[test]` ensures that dependencies required for running the tests are installed.

NOTE: Depending on how many cores your machine has and how many you've allocated to Docker,
you may need to modify the `cores per node` setting in the configuration yaml file to match
you may need to modify the ``cores_per_node`` setting in the configuration yaml file to match
your machine's specifications to get all tests to pass.
2 changes: 2 additions & 0 deletions docker/docker-compose.yml
Original file line number Diff line number Diff line change
@@ -1,3 +1,5 @@
# SPDX-License-Identifier: Apache-2.0

services:
slurmfrontend:
image: ghcr.io/noaa-gsl/dockerspackstackslurmcluster/frontend:latest
Expand Down
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