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Link upp.fd Before Referencing Its Files in Workflow Setup#4486

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aerorahul merged 7 commits intoNOAA-EMC:developfrom
AntonMFernando-NOAA:feature/upp.fd
Jan 28, 2026
Merged

Link upp.fd Before Referencing Its Files in Workflow Setup#4486
aerorahul merged 7 commits intoNOAA-EMC:developfrom
AntonMFernando-NOAA:feature/upp.fd

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@AntonMFernando-NOAA AntonMFernando-NOAA commented Jan 28, 2026

Description

  • Moves the creation of the upp.fd link earlier in link_workflow.sh to ensure it exists before any files within it are referenced or linked.

  • This prevents missing file errors during workflow setup. Uses a subshell for cleaner directory handling.

    Resolves files linked to sorc/upp.fd before sorc/upp.fd created #4396

Type of change

  • Bug fix (fixes something broken)
  • New feature (adds functionality)
  • Maintenance (code refactor, clean-up, new CI test, etc.)

Change characteristics

  • Is this change expected to change outputs (e.g. value changes to existing outputs, new files stored in COM, files removed from COM, filename changes, additions/subtractions to archives)? YES/NO (If YES, please indicate to which system(s))
    • GFS
    • GEFS
    • SFS
    • GCAFS
  • Is this a breaking change (a change in existing functionality)? NO
  • Does this change require a documentation update? NO
  • Does this change require an update to any of the following submodules? NO (If YES, please add a link to any PRs that are pending.)
    • EMC verif-global
    • GDAS
    • GFS-utils
    • GSI
    • GSI-monitor
    • GSI-utils
    • UFS-utils
    • UFS-weather-model
    • wxflow

How has this been tested?

  • Build and link on hera successfully

Checklist

  • Any dependent changes have been merged and published
  • My code follows the style guidelines of this project
  • I have performed a self-review of my own code
  • I have commented my code, particularly in hard-to-understand areas
  • I have documented my code, including function, input, and output descriptions
  • My changes generate no new warnings
  • New and existing tests pass with my changes
  • This change is covered by an existing CI test or a new one has been added
  • Any new scripts have been added to the .github/CODEOWNERS file with owners
  • I have made corresponding changes to the system documentation if necessary

aerorahul
aerorahul previously approved these changes Jan 28, 2026
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lgtm

@aerorahul aerorahul marked this pull request as ready for review January 28, 2026 20:12
@aerorahul aerorahul merged commit debf5c9 into NOAA-EMC:develop Jan 28, 2026
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@AntonMFernando-NOAA AntonMFernando-NOAA deleted the feature/upp.fd branch January 30, 2026 15:34
JessicaMeixner-NOAA pushed a commit to JessicaMeixner-NOAA/global-workflow that referenced this pull request Jan 30, 2026
…C#4486)

# Description
- Moves the creation of the `upp.fd` link earlier in link_workflow.sh to
ensure it exists before any files within it are referenced or linked.
- This prevents missing file errors during workflow setup. Uses a
subshell for cleaner directory handling.

  Resolves NOAA-EMC#4396
DavidHuber-NOAA pushed a commit that referenced this pull request Feb 2, 2026
This PR is pulling in 3 PRs that went into the develop branch to the
dev/gfs.v17 branch.

These PRs are: 
[4394](#4394) - atmos
prod dependency
[4486](#4486) - Fix
linking sequence
[4468](#4468) - add
timing functions and improve run_mpmd logging
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files linked to sorc/upp.fd before sorc/upp.fd created

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