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Experiment Parameters

gryk edited this page Jul 24, 2019 · 7 revisions

Experiment Parameters (Optional)

This save frame stores information about the details of an NMR experiment.

Field Schema Necessity Description
Sf_category string Required NMR-STAR Save Frame Category: NMR_spectrometer_expt
ID integer Required unique integer identifier
Name string Required arbitrary name

Experiment File (Optional)

This loop stores information about the digital files produced by a spectrometer.

Field Schema Necessity Description
Name string Required filename
Type string Required filetype
Directory_path string Required filepath
Byte_order enum Required Little Endian, etc.
Bytes_per_data_point integer Required number of bytes per data point
File_header_size integer Required size of file header
Record_header_size integer Required size of record header
Record_trailer_size integer Required size of record trailer
Compression_algorithm string Required Compression algorithm for file
Details string Required Additional details

Schedule Table Data (Optional)

This loop stores information about order in which schedule parameters are present in the schedule file.

Field Schema Necessity Description
Param_ordinal positive integer Required Parameter Key
Param_tag string Required Parameter Value

Spectral_param (Optional)

This loop stores information about ...

Field Schema Necessity Description
Dim positive integer Required Dimension
Parameter string Required Parameter Key
Value string Required Parameter Value
save_experiment_parameters          # This save frame is used to capture information
                                    # specific to an experiment that uses the NUS
                                    # schedule defined above.
			
   _NMR_spec_expt.Sf_category		NMR_spectrometer_expt	
   _NMR_spec_expt.ID			1	
   _NMR_spec_expt.Name			HNCO	
   
   loop
     _NMR_experiment_file.Name                     
     _NMR_experiment_file.Type                    
     _NMR_experiment_file.Directory_path         
     _NMR_experiment_file.Byte_order             
     _NMR_experiment_file.Bytes_per_data_point    
     _NMR_experiment_file.File_header_size        
     _NMR_experiment_file.Record_header_size      
     _NMR_experiment_file.Record_trailer_size      
     _NMR_experiment_file.Compression_algorithm   
     _NMR_experiment_file.Details                 

	HNCO	na	na	'little endian'	4	na	na	na	na
	
    stop_
    
;
Text field used to report additional information relevant to the specific experiment.
;

    loop_          
      _Schedule_table_data_org.Param_ordinal 
      _Schedule_table_data_org.Param_tag             

    1     ‘_Schedule.Time_index_dim2’
    2     ‘_Schedule.Phase_index_dim2’
    3     ‘_Schedule.AuxA_index’              
    4     ‘_Schedule.Time_index_dim3’
    5     ‘_Schedule.Phase_value_dim3’

    stop_

    loop_       # Put values relevant to a specific experimental spectral instance
                # where the schedule is used in a separate loop. 

       _Spectral_param.Dim
       _Spectral_param.Parameter
       _Spectral_param.Value

         1         size                             na 
         1         spectral_width_Hz                5000
         1         obs_freq_MHz_at_center           500
         1         obs_freq_at 0ppm                 499.90
         1         ppm_at_center                    4.55
         1         zero_order_phase_corr            -50.0           
         1         first_order_phase_corr           0.0             
         1         nucleus                          1H
         1         label                            HN
         1         details                          na

         2         size                             na 
         2         spectral_width_Hz                na
         2         obs_freq_MHz_at_center           na
         2         obs_freq_at 0ppm                 na
         2         ppm_at_center                    na
         2         zero_order_phase_corr            -50.0           
         2         first_order_phase_corr           0.0             
         2         nucleus                          15N
         2         label                            N
         2         details                          na

         3         size                             na 
         3         spectral_width_Hz                na
         3         obs_freq_MHz_at_center           na
         3         obs_freq_at 0ppm                 na
         3         ppm_at_center                    na
         3         zero_order_phase_corr            -50.0           
         3         first_order_phase_corr           0.0             
         3         nucleus                          13C
         3         label                            CO
         3         details                          na

  stop_

save_