readme and beagle

NEFSC · Nov 22, 2024 · 5e680cc · 5e680cc
1 parent 6ab0f38
commit 5e680cc
Showing 1 changed file with 0 additions and 9 deletions.
diff --git a/HPC_analysis/output/Popgen/angsd/README.md b/HPC_analysis/output/Popgen/angsd/README.md
@@ -267,15 +267,6 @@ vcftools --vcf out.5.recode.vcf --out out.5 --missing-indv
 library(readr)
 library(tidyverse)
 
-out_5_imiss <- read_tsv("out.5.imiss") %>%
-                  extract(INDV, "pop", "(\\w+)_", remove = FALSE)
-
-out_5_imiss %>% count(pop)
-```
-
-# Load the data in Rstudio 
-# open the out.5.imiss file in R
-# note the read_tsv is in the package readr
 out_5_imiss <- read_tsv("out.5.imiss") %>%
                   extract(INDV, "pop", "(\\w+)_", remove = FALSE)