Skip to content
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
29 changes: 29 additions & 0 deletions README.md
Original file line number Diff line number Diff line change
@@ -0,0 +1,29 @@
This is the readme for the model associated with the paper

Esposito U, Giugliano M, van Rossum M, Vasilaki E (2014) "Measuring
symmetry, asymmetry and randomness in neural network connectivity"
*PLoS One* 9:e100805

The matlab code reproduces Figures 1, 2, 3A and 3C from the paper. To
run it you need to use Matlab with Symbolic Math Toolbox and
Statistics Toolbox.

## Content and usage:

1. Unzip Espositoetal2013_MatlabCode into an empty directory. The code
is organized in 8 .m files.
2. To obtain the graphs of Fig. 1 run Uniform_PDFs.m (for
Fig. 1A,B,C,D) and Uniform_PDFs_pruned.m (for Fig. 1E,F,G,H).
For example the figure generated for 1D looks like:

![screenshot](./screenshot.png)
3. To obtain the graphs of Fig. 2 run Gaussian_PDFs.m (for
Fig. 2A,B,C,D) and Gaussian_PDFs_pruned.m (for Fig. 2E,F,G,H).
4. To obtain the graphs of Fig. 3A,C run Uniform_Statistics.m (for
Fig. 3A) and Gaussian_Statistics.m (for Fig. 3C).
5. Uniform_Statistics.m calls sym_measure.m.
6. Gaussian_Statistics.m calls sym_measure.m and correl.m.

---

2025-07-09: Converted README to Markdown.
25 changes: 0 additions & 25 deletions Readme.html

This file was deleted.