The aim of this crate is to provide Microbiology friendly Rust functions for bioinformatics.
Very much under construction!
Some concepts with many thanks to Rust-bio
Please see the Roadmap for futher details here
To install Rust - please see here Rust install or with Conda
If you would like to contribute please follow the Rust code of conduct
Questions and comments - please join the Discord server :) here
Currently there is functionality for:
1. A Genbank to GFF parser
2. An Embl to GFF and GBK parser
3. Calculate sequence metrics e.g. hydrophobicity, distance measures
4. A Heatmap plot with wasm and d3.js
To see more on how to use have a look at usage here
To use a specific workspace (at the moment microSeqIO or heatmap) clone the project, cd into the specific directory required and build the project from there
For more background please see https://LCrossman.github.io/microBioRust_details