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artgoldberg committed May 27, 2020
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# Data and code for Veronica Porubsky, et al., *Ten best practices for making reproducible biochemical models*, Cell Systems, 2020
# Data and code for Porubsky and Goldberg, et al., *Best practices for making reproducible biochemical models*, Cell Systems, 2020

This Git repository contains data and code used in the paper Veronica Porubsky, Arthur Goldberg, Anand Rampadarath, David Nickerson, Jonathan Karr, and Herbert Sauro, *Ten best practices for making reproducible biochemical models*, Cell Systems, 2020.
This Git repository contains data and code used in the paper Veronica Porubsky, Arthur Goldberg, Anand Rampadarath, David Nickerson, Jonathan Karr, and Herbert Sauro, *Best practices for making reproducible biochemical models*, Cell Systems, 2020.

[//]: # (Todo: add exact paper reference.)


## Overview
This Git repository contains code and data that were used to create Table 2, Standards and tools ordered by estimated influence.
This Git repository contains code and data that were used to create Table 2, Influence of standards and tools.
Reproduce the table by following the instructions below.

## Prerequisites
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1. pip
1. git
1. Python 3
1. An account to the Google Search API provided by [SerpApi](https://serpapi.com/). As of April, 2020, [free developer trials](https://serpapi.com/#pricing) are available. The 5,000 searches allowed by a trial will be amply sufficient to run this software.
1. An account to the Google Search API provided by [SerpApi](https://serpapi.com/). As of June, 2020, [free developer trials](https://serpapi.com/#pricing) are available. The 5,000 searches allowed by a trial will be amply sufficient to run this software.
1. Optionally, an [NCBI account](https://www.ncbi.nlm.nih.gov/account/), which will speed up the program.

## Instructions
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