MSc Bioinformatics | Building scalable pipelines
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tcf7l2-analysis-pipeline
tcf7l2-analysis-pipeline PublicPython pipeline using Biopython and NCBI Entrez to analyze TCF7L2 gene sequence and genetic variants (e.g., rs7903146). Explores diabetes risk through SNP data. Includes GC plots and variant reports.
Python
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diet-gene-expression-pipeline
diet-gene-expression-pipeline PublicAutomated pipeline downloading GEO data (GSE115342) to study low-carb ketogenic diet effects on mouse liver gene expression. Features pandas analysis, bar/volcano plots, and fold change visualization.
Python
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